RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 NKD2Q969F2 451 aaPredicted RBP18.55■□□□□ 0.56
MRPL28-208ENST00000469744 C8orf48Q96LL4 319 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 KCNK16Q96T55 309 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 EBF3Q9H4W6 596 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 LMAN1LQ9HAT1 526 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 HPS4Q9NQG7 708 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 RBM12Q9NTZ6 932 aaKnown RBP18.55■□□□□ 0.56
MRPL28-208ENST00000469744 ATP1A1P05023 1023 aaKnown RBP18.54■□□□□ 0.56
MRPL28-208ENST00000469744 CCDC172P0C7W6 258 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 CCDC130P13994 396 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 NOP14P78316 857 aaKnown RBP18.54■□□□□ 0.56
MRPL28-208ENST00000469744 CSTF1Q05048 431 aaKnown RBP18.54■□□□□ 0.56
MRPL28-208ENST00000469744 CETN1Q12798 172 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 PON2Q15165 354 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 PAQR9Q6ZVX9 377 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 VPS36Q86VN1 386 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 MSANTD4Q8NCY6 345 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 TAF4BQ92750 862 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 TNIP3Q96KP6 325 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 NOX5Q96PH1 765 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 FAM83CQ9BQN1 747 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 TTLL2Q9BWV7 592 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 C8orf33Q9H7E9 229 aaPredicted RBP18.54■□□□□ 0.56
MRPL28-208ENST00000469744 KIF9Q9HAQ2 790 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 FAM49BQ9NUQ9 324 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 TFR2Q9UP52 801 aa18.54■□□□□ 0.56
MRPL28-208ENST00000469744 OTOL1A6NHN0 477 aaPredicted RBP18.53■□□□□ 0.56
MRPL28-208ENST00000469744 USP17L7P0C7H9 530 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 CHRNB1P11230 501 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 MAGEA9P43362 315 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 APBA1Q02410 837 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 ITPRIPL2Q3MIP1 535 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 CC2D1AQ6P1N0 951 aaPredicted RBP18.53■□□□□ 0.56
MRPL28-208ENST00000469744 FUKQ8N0W3 1084 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 C12orf29Q8N999 325 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 IMPG2Q9BZV3 1241 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 INTS2Q9H0H0 1204 aaKnown RBP18.53■□□□□ 0.56
MRPL28-208ENST00000469744 CHRDQ9H2X0 955 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 KRT82Q9NSB4 513 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 TRPM5Q9NZQ8 1165 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 INTUQ9ULD6 942 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 NENFQ9UMX5 172 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 DUSP10Q9Y6W6 482 aa18.53■□□□□ 0.56
MRPL28-208ENST00000469744 EP300Q09472 2414 aaPredicted RBP18.53■□□□□ 0.56
MRPL28-208ENST00000469744 GVINP1Q7Z2Y8 2422 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 A0A087X0T9 212 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 MACROD2A1Z1Q3 448 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 SOBPA7XYQ1 873 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 FAM228BP0C875 321 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 HDCP19113 662 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 CD58P19256 250 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 CLCN6P51797 869 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 MLLT6P55198 1093 aaPredicted RBP18.52■□□□□ 0.56
MRPL28-208ENST00000469744 TAF10Q12962 218 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 ZNF268Q14587 947 aaPredicted RBP18.52■□□□□ 0.56
MRPL28-208ENST00000469744 BRD3Q15059 726 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 ZNF77Q15935 545 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 Q6ZS52 159 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 ZNF572Q7Z3I7 529 aaPredicted RBP18.52■□□□□ 0.56
MRPL28-208ENST00000469744 RALGPS2Q86X27 583 aaPredicted RBP18.52■□□□□ 0.56
MRPL28-208ENST00000469744 SCAMP5Q8TAC9 235 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 SLC2A14Q8TDB8 520 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 SH3RF2Q8TEC5 729 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 SEMA4DQ92854 862 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 CEP295NLQ96MC4 621 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 TWNKQ96RR1 684 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 TMEM8AQ9HCN3 771 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 OGFRQ9NZT2 677 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 APEX2Q9UBZ4 518 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 SNX12Q9UMY4 172 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 WNT6Q9Y6F9 365 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 ATG2BQ96BY7 2078 aa18.52■□□□□ 0.56
MRPL28-208ENST00000469744 ZNF840PA6NDX5 716 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 AP1G2O75843 785 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 TCP1P17987 556 aaKnown RBP18.52■□□□□ 0.55
MRPL28-208ENST00000469744 SOX5P35711 763 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 ZXDBP98169 803 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 PTK2Q05397 1052 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 USP4Q13107 963 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 RUNX3Q13761 415 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 GAS6Q14393 721 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 CBWD6Q4V339 395 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 CBWD3Q5JTY5 395 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 CBWD5Q5RIA9 395 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 ZNF571Q7Z3V5 609 aaPredicted RBP18.52■□□□□ 0.55
MRPL28-208ENST00000469744 CHFRQ96EP1 664 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 SMARCD1Q96GM5 515 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 MSANTD3Q96H12 275 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 NIF3L1Q9GZT8 377 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 DMAP1Q9NPF5 467 aaPredicted RBP18.52■□□□□ 0.55
MRPL28-208ENST00000469744 FAM53CQ9NYF3 392 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 RAB21Q9UL25 225 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 MYO16Q9Y6X6 1858 aa18.52■□□□□ 0.55
MRPL28-208ENST00000469744 ZNF292O60281 2723 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 BEST1O76090 585 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 MOCS3O95396 460 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 ADORA2BP29275 332 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 MXI1P50539 228 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 IFI16Q16666 785 aaKnown RBP18.51■□□□□ 0.55
MRPL28-208ENST00000469744 NAIF1Q69YI7 327 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms