RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 CCDC15Q0P6D6 951 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 SEPT7Q16181 437 aaKnown RBP15.24■□□□□ 0.03
CBWD3-205ENST00000469687 SH2D5Q6ZV89 423 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 ZNF534Q76KX8 674 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 DNAJB3Q8WWF6 145 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 KCTD15Q96SI1 283 aaPredicted RBP15.24■□□□□ 0.03
CBWD3-205ENST00000469687 TBCBQ99426 244 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 SMYD2Q9NRG4 433 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 CNTN3Q9P232 1028 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 MORF4L1Q9UBU8 362 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 USH1CQ9Y6N9 552 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 F5H423 210 aaPredicted RBP15.24■□□□□ 0.03
CBWD3-205ENST00000469687 UGT1A9O60656 530 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 LPXNO60711 386 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 INHBAP08476 426 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 CYP2C9P11712 490 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 DARSP14868 501 aaKnown RBP15.24■□□□□ 0.03
CBWD3-205ENST00000469687 TSHRP16473 764 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 TKTP29401 623 aaKnown RBP15.24■□□□□ 0.03
CBWD3-205ENST00000469687 GRIA1P42261 906 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 FBXO47Q5MNV8 452 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 ARHGAP17Q68EM7 881 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 CDHR3Q6ZTQ4 885 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 MPP5Q8N3R9 675 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 PPM1NQ8N819 430 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 SLC2A14Q8TDB8 520 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 USP6NLQ92738 828 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 FAM111AQ96PZ2 611 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 LRRC37BQ96QE4 947 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 UGT1A7Q9HAW7 530 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 UGT1A10Q9HAW8 530 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 UGT1A8Q9HAW9 530 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 SPON1Q9HCB6 807 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 SLC5A4Q9NY91 659 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 DCTN4Q9UJW0 460 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 AP4E1Q9UPM8 1137 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 PIN4Q9Y237 131 aaKnown RBP15.24■□□□□ 0.03
CBWD3-205ENST00000469687 IQANK1A0A1B0GTG1 560 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 SMIM28A0A1B0GU29 152 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 PIRO00625 290 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 TM9SF1O15321 606 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 IGFBP6P24592 240 aaPredicted RBP15.23■□□□□ 0.03
CBWD3-205ENST00000469687 ETV4P43268 484 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 NEK3P51956 506 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 BST2Q10589 180 aaKnown RBP15.23■□□□□ 0.03
CBWD3-205ENST00000469687 DPYSL2Q16555 572 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 SLC26A9Q7LBE3 791 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 UNC93AQ86WB7 457 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 LRRC6Q86X45 466 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 CTAGE3PQ8IX95 158 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 ANKRD52Q8NB46 1076 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 RFWD2Q8NHY2 731 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 UTP4Q969X6 686 aaKnown RBP15.23■□□□□ 0.03
CBWD3-205ENST00000469687 SYT17Q9BSW7 474 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 KLC2Q9H0B6 622 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 TMPRSS4Q9NRS4 437 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 KANSL3Q9P2N6 904 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 ZC3H7BQ9UGR2 993 aaKnown RBP15.23■□□□□ 0.03
CBWD3-205ENST00000469687 L3MBTL1Q9Y468 752 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 IKBKGQ9Y6K9 419 aa15.23■□□□□ 0.03
CBWD3-205ENST00000469687 KPNA7A9QM74 516 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 GNL1P36915 607 aaPredicted RBP15.22■□□□□ 0.03
CBWD3-205ENST00000469687 BCAT1P54687 386 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 PITX1P78337 314 aaPredicted RBP15.22■□□□□ 0.03
CBWD3-205ENST00000469687 VSIG1Q86XK7 387 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 STK32AQ8WU08 396 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 CENPIQ92674 756 aaPredicted RBP15.22■□□□□ 0.03
CBWD3-205ENST00000469687 PTPN18Q99952 460 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 HAO1Q9UJM8 370 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 RRN3P2A6NIE6 340 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 SLC15A5A6NIM6 579 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 A6NJR5 290 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 CBX6O95503 412 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 F2P00734 622 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 GOT1P17174 413 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 AMPD1P23109 780 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 PTPN9P43378 593 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 SETDB1Q15047 1291 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 TRMT10BQ6PF06 316 aaKnown RBP15.22■□□□□ 0.03
CBWD3-205ENST00000469687 KCNT2Q6UVM3 1135 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 FAM131BQ86XD5 332 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 ARRDC4Q8NCT1 418 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 AGAP11Q8TF27 550 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 TTC17Q96AE7 1141 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 ALKBH8Q96BT7 664 aaKnown RBP15.22■□□□□ 0.03
CBWD3-205ENST00000469687 APOPT1Q96IL0 206 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 CSPG4P5Q96PW8 444 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 MANSC1Q9H8J5 431 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 CACNG4Q9UBN1 327 aa15.22■□□□□ 0.03
CBWD3-205ENST00000469687 UBQLN1Q9UMX0 589 aaKnown RBP15.22■□□□□ 0.03
CBWD3-205ENST00000469687 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.22■□□□□ 0.03
CBWD3-205ENST00000469687 CFAP69A5D8W1 941 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 TRIM49D1C9J1S8 452 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 CLDN5O00501 218 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 TREHO43280 583 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 DHRS4L1P0CG22 281 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 T-ENOLP0DO92 83 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 VAV1P15498 845 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 GTF2A2P52657 109 aa15.21■□□□□ 0.03
CBWD3-205ENST00000469687 SLC18A2Q05940 514 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms