RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PDIA4P13667 645 aaKnown RBP12.94□□□□□ -0.34
HDAC3-204ENST00000469207 CD58P19256 250 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 AP3M2P53677 418 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 SEMA3BQ13214 749 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 SCD5Q86SK9 330 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 SLC9A9Q8IVB4 645 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 CEP57L1Q8IYX8 460 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 GATA6Q92908 595 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 CYFIP2Q96F07 1278 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 CAMK1GQ96NX5 476 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 FBXO44Q9H4M3 255 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 MMRN2Q9H8L6 949 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 KLK13Q9UKR3 277 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 SLC6A14Q9UN76 642 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 MAPK8IP1Q9UQF2 711 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 CEP295Q9C0D2 2601 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 SPEGQ15772 3267 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 CACNG3O60359 315 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 KLKB1P03952 638 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 RPN1P04843 607 aaKnown RBP12.93□□□□□ -0.34
HDAC3-204ENST00000469207 HMBSP08397 361 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 SLFN14P0C7P3 912 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 FAM200BP0CF97 657 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 TRIM49P0CI25 452 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 TRIM49CP0CI26 452 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 HOXB3P14651 431 aaPredicted RBP12.93□□□□□ -0.34
HDAC3-204ENST00000469207 GCLMP48507 274 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 SIM1P81133 766 aaPredicted RBP12.93□□□□□ -0.34
HDAC3-204ENST00000469207 GFPT1Q06210 699 aaPredicted RBP12.93□□□□□ -0.34
HDAC3-204ENST00000469207 PPP3CAQ08209 521 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 BYSLQ13895 437 aaKnown RBP12.93□□□□□ -0.34
HDAC3-204ENST00000469207 DUOXA1Q1HG43 343 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 ZNF394Q53GI3 561 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 SPDYCQ5MJ68 293 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 C10orf120Q5SQS8 335 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 PEAR1Q5VY43 1037 aaPredicted RBP12.93□□□□□ -0.34
HDAC3-204ENST00000469207 PIP4P1Q86T03 277 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 UNC93AQ86WB7 457 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 MINDY1Q8N5J2 469 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 TRIML1Q8N9V2 468 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 KDF1Q8NAX2 398 aaPredicted RBP12.93□□□□□ -0.34
HDAC3-204ENST00000469207 GOLGA5Q8TBA6 731 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 KCNV2Q8TDN2 545 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 TAS1R2Q8TE23 839 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 MRGPRX1Q96LB2 322 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 HSPA12BQ96MM6 686 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 XPO6Q96QU8 1125 aaKnown RBP12.93□□□□□ -0.34
HDAC3-204ENST00000469207 HNRNPABQ99729 332 aaKnown RBP12.93□□□□□ -0.34
HDAC3-204ENST00000469207 GABRG3Q99928 467 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 CAPN10Q9HC96 672 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 CYLDQ9NQC7 956 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 EXOC1Q9NV70 894 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.93□□□□□ -0.34
HDAC3-204ENST00000469207 RCOR1Q9UKL0 485 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 CLEC4EQ9ULY5 219 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 SCML2Q9UQR0 700 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 ZZEF1O43149 2961 aa12.93□□□□□ -0.34
HDAC3-204ENST00000469207 PDXKO00764 312 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 SERPINF2P08697 491 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 P4HA1P13674 534 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 CD59P13987 128 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 PIK3CAP42336 1068 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 PLA2G4AP47712 749 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 DGKGP49619 791 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 VAMP7P51809 220 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 KIF11P52732 1056 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 ATXN3P54252 364 aaPredicted RBP12.92□□□□□ -0.34
HDAC3-204ENST00000469207 CACNA1EQ15878 2313 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 PPP1R26Q5T8A7 1209 aaPredicted RBP12.92□□□□□ -0.34
HDAC3-204ENST00000469207 SDE2Q6IQ49 451 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 Q6ZNB5 142 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 NUDT18Q6ZVK8 323 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 TRMT11Q7Z4G4 463 aaKnown RBP12.92□□□□□ -0.34
HDAC3-204ENST00000469207 RGL4Q8IZJ4 473 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 CHCHD4Q8N4Q1 142 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 TMC2Q8TDI7 906 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 EEF2KMTQ96G04 330 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 DUSP9Q99956 384 aaKnown RBP12.92□□□□□ -0.34
HDAC3-204ENST00000469207 SLC32A1Q9H598 525 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 MARK1Q9P0L2 795 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 WDR35Q9P2L0 1181 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 NAGPAQ9UK23 515 aa12.92□□□□□ -0.34
HDAC3-204ENST00000469207 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
HDAC3-204ENST00000469207 IKBKBO14920 756 aa12.91□□□□□ -0.34
HDAC3-204ENST00000469207 STC2O76061 302 aa12.91□□□□□ -0.34
HDAC3-204ENST00000469207 PFKFB1P16118 471 aa12.91□□□□□ -0.34
HDAC3-204ENST00000469207 GEN1Q17RS7 908 aa12.91□□□□□ -0.34
HDAC3-204ENST00000469207 PREPLQ4J6C6 727 aaPredicted RBP12.91□□□□□ -0.34
HDAC3-204ENST00000469207 KIAA1324Q6UXG2 1013 aaKnown RBP12.91□□□□□ -0.34
HDAC3-204ENST00000469207 SLC36A4Q6YBV0 504 aa12.91□□□□□ -0.34
HDAC3-204ENST00000469207 TMEM174Q8WUU8 243 aa12.91□□□□□ -0.34
HDAC3-204ENST00000469207 NDRG1Q92597 394 aaKnown RBP12.91□□□□□ -0.34
HDAC3-204ENST00000469207 TAF4BQ92750 862 aa12.91□□□□□ -0.34
HDAC3-204ENST00000469207 ZNF419Q96HQ0 510 aaPredicted RBP12.91□□□□□ -0.34
HDAC3-204ENST00000469207 NT5C1AQ9BXI3 368 aa12.91□□□□□ -0.34
HDAC3-204ENST00000469207 DNMT3LQ9UJW3 386 aa12.91□□□□□ -0.34
HDAC3-204ENST00000469207 LSM7Q9UK45 103 aaKnown RBP12.91□□□□□ -0.34
HDAC3-204ENST00000469207 FBXO10Q9UK96 956 aa12.91□□□□□ -0.34
HDAC3-204ENST00000469207 STON1Q9Y6Q2 735 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms