RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 ZWILCHQ9H900 591 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 STK32BQ9NY57 414 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 ARPP21Q9UBL0 812 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-205ENST00000469043 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-205ENST00000469043 ABCF2Q9UG63 623 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 AFF4Q9UHB7 1163 aaKnown RBP5.1□□□□□ -1.59
SCFD1-205ENST00000469043 ZHX1Q9UKY1 873 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-205ENST00000469043 TRGV11A0A075B6L2 103 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 HMX3A6NHT5 357 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 PIP5K1BO14986 540 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 THAP12O43422 761 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 PRSS23O95084 383 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 BAG2O95816 211 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 ANXA2P07355 339 aaKnown RBP5.09□□□□□ -1.59
SCFD1-205ENST00000469043 ITGA5P08648 1049 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 TYRP14679 529 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 JUPP14923 745 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 EN2P19622 333 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-205ENST00000469043 SLC6A2P23975 617 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 CHMP24386 653 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 HOXD13P35453 343 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 ALDH1A3P47895 512 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 ZNF81P51508 661 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 CCR5P51681 352 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 RPS16P62249 146 aaKnown RBP5.09□□□□□ -1.59
SCFD1-205ENST00000469043 ZNF788Q6ZQV5 615 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 CATSPERGQ6ZRH7 1159 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 PTF1AQ7RTS3 328 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 KRT74Q7RTS7 529 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 GALNTL5Q7Z4T8 443 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 CHD1LQ86WJ1 897 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 IQCA1Q86XH1 822 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 FITM2Q8N6M3 262 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 APPL2Q8NEU8 664 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 CASKIN2Q8WXE0 1202 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 MARS2Q96GW9 593 aaKnown RBP5.09□□□□□ -1.59
SCFD1-205ENST00000469043 SPATA17Q96L03 361 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 SNX22Q96L94 193 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 COG8Q96MW5 612 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 TIMP4Q99727 224 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 C7orf25Q9BPX7 421 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 XPO4Q9C0E2 1151 aaKnown RBP5.09□□□□□ -1.59
SCFD1-205ENST00000469043 ARHGAP39Q9C0H5 1083 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 MLXIPQ9HAP2 919 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 SARS2Q9NP81 518 aaKnown RBP5.09□□□□□ -1.59
SCFD1-205ENST00000469043 IL17RBQ9NRM6 502 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 TMEM160Q9NX00 188 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 ODF2LQ9ULJ1 636 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 TMCC3Q9ULS5 477 aa5.09□□□□□ -1.59
SCFD1-205ENST00000469043 SCAF8Q9UPN6 1271 aaKnown RBP5.09□□□□□ -1.59
SCFD1-205ENST00000469043 CCDC78A2IDD5 438 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 WNT10BO00744 389 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 CLGNO14967 610 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 PTP4A3O75365 173 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 ENDOD1O94919 500 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 SGPL1O95470 568 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 NDST3O95803 873 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 HNRNPA1P09651 372 aaKnown RBP eCLIP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 CST5P28325 142 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 CTGFP29279 349 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 GUCY1A2P33402 732 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 TNNT3P45378 269 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 COPAP53621 1224 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 CALD1Q05682 793 aaKnown RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 CHRNDQ07001 517 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 CUL4BQ13620 913 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 DCTN1Q14203 1278 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 BECN1Q14457 450 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 SMC1AQ14683 1233 aaKnown RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 NOMO1Q15155 1222 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 KHDC1Q4VXA5 237 aaKnown RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 KHDC1LQ5JSQ8 128 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 SLC9C2Q5TAH2 1124 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 PLBD1Q6P4A8 553 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 KLHL17Q6TDP4 642 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 SEM1Q6ZVN7 128 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 RHOT1Q8IXI2 618 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 CELF5Q8N6W0 485 aaKnown RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 OR2I1PQ8NGU4 316 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 SNX21Q969T3 373 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 NMD3Q96D46 503 aaKnown RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 EID2BQ96D98 161 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 CYFIP2Q96F07 1278 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 LRRC46Q96FV0 321 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 CLPTM1LQ96KA5 538 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 YME1L1Q96TA2 773 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 GPR63Q9BZJ6 419 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 SIL1Q9H173 461 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 SEPSECSQ9HD40 501 aaKnown RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 DIAPH3Q9NSV4 1193 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 ABCF3Q9NUQ8 709 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 FBXO34Q9NWN3 711 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 PIH1D1Q9NWS0 290 aaKnown RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 ADD3Q9UEY8 706 aaKnown RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 FEZ2Q9UHY8 353 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 HERC5Q9UII4 1024 aaKnown RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 SCOCQ9UIL1 159 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 AJAP1Q9UKB5 411 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-205ENST00000469043 PCDHA6Q9UN73 950 aa5.08□□□□□ -1.6
SCFD1-205ENST00000469043 RRP7AQ9Y3A4 280 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms