RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TP63Q9H3D4 680 aaPredicted RBP5.91□□□□□ -1.46
LSM5-209ENST00000468872 HELLSQ9NRZ9 838 aa5.91□□□□□ -1.46
LSM5-209ENST00000468872 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.91□□□□□ -1.46
LSM5-209ENST00000468872 HERC5Q9UII4 1024 aaKnown RBP5.91□□□□□ -1.46
LSM5-209ENST00000468872 RIMKLBQ9ULI2 386 aa5.91□□□□□ -1.46
LSM5-209ENST00000468872 ENTPD2Q9Y5L3 495 aa5.91□□□□□ -1.46
LSM5-209ENST00000468872 DNPH1O43598 174 aa5.9□□□□□ -1.46
LSM5-209ENST00000468872 VIPP01282 170 aa5.9□□□□□ -1.46
LSM5-209ENST00000468872 ANXA6P08133 673 aa5.9□□□□□ -1.46
LSM5-209ENST00000468872 ITGA2BP08514 1039 aa5.9□□□□□ -1.46
LSM5-209ENST00000468872 RBL1P28749 1068 aa5.9□□□□□ -1.46
LSM5-209ENST00000468872 EIF2B5Q13144 721 aaKnown RBP5.9□□□□□ -1.46
LSM5-209ENST00000468872 PTPRRQ15256 657 aa5.9□□□□□ -1.46
LSM5-209ENST00000468872 ABHD5Q8WTS1 349 aa5.9□□□□□ -1.46
LSM5-209ENST00000468872 GLG1Q92896 1179 aa5.9□□□□□ -1.46
LSM5-209ENST00000468872 WDR24Q96S15 920 aa5.9□□□□□ -1.46
LSM5-209ENST00000468872 HAPLN3Q96S86 360 aa5.9□□□□□ -1.46
LSM5-209ENST00000468872 VN1R3Q9BXE9 311 aa5.9□□□□□ -1.46
LSM5-209ENST00000468872 INO80BQ9C086 356 aaPredicted RBP5.9□□□□□ -1.46
LSM5-209ENST00000468872 FSCN3Q9NQT6 498 aa5.9□□□□□ -1.46
LSM5-209ENST00000468872 SRP68Q9UHB9 627 aaKnown RBP5.9□□□□□ -1.46
LSM5-209ENST00000468872 COL15A1P39059 1388 aa5.9□□□□□ -1.47
LSM5-209ENST00000468872 FER1L4A9Z1Z3 1794 aa5.9□□□□□ -1.47
LSM5-209ENST00000468872 J3KTA2 159 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 SNX2O60749 519 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 CBFA2T3O75081 653 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 CHRM2P08172 466 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 ELFN1P0C7U0 828 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 WT1P19544 449 aaPredicted RBP5.89□□□□□ -1.47
LSM5-209ENST00000468872 YY1P25490 414 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 KLRK1P26718 216 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 ALDH18A1P54886 795 aaKnown RBP5.89□□□□□ -1.47
LSM5-209ENST00000468872 ARL4CP56559 192 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 TIRAPP58753 221 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 ITIH3Q06033 890 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 GRM4Q14833 912 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 TXNRD1Q16881 649 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 KLHL17Q6TDP4 642 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 CLEC9AQ6UXN8 241 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 RFX8Q6ZV50 586 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 METTL25Q8N6Q8 603 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 C11orf44Q8N8P7 122 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 SUN3Q8TAQ9 357 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 PABPC3Q9H361 631 aaKnown RBP5.89□□□□□ -1.47
LSM5-209ENST00000468872 GLOD4Q9HC38 313 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 CPNE5Q9HCH3 593 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 PRDM8Q9NQV8 689 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 GTF2A1LQ9UNN4 478 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 USP22Q9UPT9 525 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 DRG1Q9Y295 367 aaKnown RBP5.89□□□□□ -1.47
LSM5-209ENST00000468872 SLC27A6Q9Y2P4 619 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 ADGRA2Q96PE1 1338 aa5.89□□□□□ -1.47
LSM5-209ENST00000468872 A1L4Q6 167 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 VWC2LB2RUY7 222 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 ZSCAN9O15535 394 aaPredicted RBP5.88□□□□□ -1.47
LSM5-209ENST00000468872 ACTL6BO94805 426 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 CDK4P11802 303 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 CLCN2P51788 898 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 PROK1P58294 105 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 NXPH1P58417 271 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 FOXF2Q12947 444 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 TBCCQ15814 346 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 TSTD2Q5T7W7 516 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 LRCH2Q5VUJ6 765 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 MOGAT3Q86VF5 341 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 ANKRD18AQ8IVF6 992 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 SLC44A2Q8IWA5 706 aaPredicted RBP5.88□□□□□ -1.47
LSM5-209ENST00000468872 SRRM1Q8IYB3 904 aaKnown RBP5.88□□□□□ -1.47
LSM5-209ENST00000468872 SCAMP5Q8TAC9 235 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 SOCS4Q8WXH5 440 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 FKBP10Q96AY3 582 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 SARAFQ96BY9 339 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 RTKNQ9BST9 563 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 FAM167BQ9BTA0 163 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 ZCWPW1Q9H0M4 648 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 C9orf78Q9NZ63 289 aaPredicted RBP5.88□□□□□ -1.47
LSM5-209ENST00000468872 DKK3Q9UBP4 350 aa5.88□□□□□ -1.47
LSM5-209ENST00000468872 INO80B-WBP1J3KQ70 363 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 EXOC5O00471 708 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 SLC16A3O15427 465 aaKnown RBP5.87□□□□□ -1.47
LSM5-209ENST00000468872 IRAK2O43187 625 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 TAF5LO75529 589 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 GPD1P21695 349 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 LIPAP38571 399 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 MTHFSP49914 203 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 POLE2P56282 527 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 AP2B1P63010 937 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 POU5F1BQ06416 359 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 CLCA4Q14CN2 919 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 TREML2Q5T2D2 321 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 CYP26C1Q6V0L0 522 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 ZNF788Q6ZQV5 615 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 CAND1Q86VP6 1230 aaKnown RBP5.87□□□□□ -1.47
LSM5-209ENST00000468872 CCDC117Q8IWD4 279 aaPredicted RBP5.87□□□□□ -1.47
LSM5-209ENST00000468872 FSTL5Q8N475 847 aaPredicted RBP5.87□□□□□ -1.47
LSM5-209ENST00000468872 RILPL2Q969X0 211 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 R3HDM4Q96D70 268 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 NUDT22Q9BRQ3 303 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 DDX23Q9BUQ8 820 aaKnown RBP5.87□□□□□ -1.47
LSM5-209ENST00000468872 RRN3Q9NYV6 651 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms