RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 AKAP10O43572 662 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 SLC28A2O43868 658 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 IGSF3O75054 1194 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 FGF2P09038 288 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 TACR3P29371 465 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 PTDSS1P48651 473 aaKnown RBP4.06□□□□□ -1.76
SSB-208ENST00000468600 GPC5P78333 572 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 B4GALNT1Q00973 533 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 SLC14A1Q13336 389 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 MTX1Q13505 466 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 STIM1Q13586 685 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 CLCA4Q14CN2 919 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 FAM110CQ1W6H9 321 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 C16orf71Q8IYS4 520 aaPredicted RBP4.06□□□□□ -1.76
SSB-208ENST00000468600 ZBTB34Q8NCN2 500 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 NR4A3Q92570 626 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 P2RY11Q96G91 374 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 ZDHHC12Q96GR4 267 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 NLRP4Q96MN2 994 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 CAMK1GQ96NX5 476 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 RTFDC1Q9BY42 306 aaPredicted RBP4.06□□□□□ -1.76
SSB-208ENST00000468600 CDH19Q9H159 772 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 ZBTB40Q9NUA8 1239 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 DKK4Q9UBT3 224 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 RIMKLBQ9ULI2 386 aa4.06□□□□□ -1.76
SSB-208ENST00000468600 USP19O94966 1318 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 TTBK1Q5TCY1 1321 aaPredicted RBP4.05□□□□□ -1.76
SSB-208ENST00000468600 IGLV5-39A0A0G2JS06 123 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 AQP7P3A6NL99 342 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 FAM227AF5H4B4 570 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 AGPSO00116 658 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 PIAS2O75928 621 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 GAS8-AS1O95177 125 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 HGFP14210 728 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 IBSPP21815 317 aaPredicted RBP4.05□□□□□ -1.76
SSB-208ENST00000468600 ADRA1DP25100 572 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 SUMO3P55854 103 aaPredicted RBP4.05□□□□□ -1.76
SSB-208ENST00000468600 YPEL5P62699 121 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 DEUP1Q05D60 604 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 EARS2Q5JPH6 523 aaKnown RBP4.05□□□□□ -1.76
SSB-208ENST00000468600 CC2D1BQ5T0F9 858 aaKnown RBP4.05□□□□□ -1.76
SSB-208ENST00000468600 GFI1BQ5VTD9 330 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 SWSAP1Q6NVH7 229 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 COL23A1Q86Y22 540 aaPredicted RBP4.05□□□□□ -1.76
SSB-208ENST00000468600 TPH2Q8IWU9 490 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 METTL25Q8N6Q8 603 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 RUNDC1Q96C34 613 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 WBP1Q96G27 269 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 MEIS3Q99687 375 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 ZCWPW1Q9H0M4 648 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 TMEM8AQ9HCN3 771 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 SEMA4BQ9NPR2 832 aaPredicted RBP4.05□□□□□ -1.76
SSB-208ENST00000468600 SELENONQ9NZV5 590 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 AFF4Q9UHB7 1163 aaKnown RBP4.05□□□□□ -1.76
SSB-208ENST00000468600 STEAP1Q9UHE8 339 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 L1RE1Q9UN81 338 aa4.05□□□□□ -1.76
SSB-208ENST00000468600 FOXN3O00409 490 aaPredicted RBP4.04□□□□□ -1.76
SSB-208ENST00000468600 RASSF9O75901 435 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 SYF2O95926 243 aaKnown RBP4.04□□□□□ -1.76
SSB-208ENST00000468600 NGFRP08138 427 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 CD63P08962 238 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 TXNP10599 105 aaKnown RBP4.04□□□□□ -1.76
SSB-208ENST00000468600 TNFRSF1BP20333 461 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 CPT1AP50416 773 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 RAB27AP51159 221 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 SLC29A2Q14542 456 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 PFKFB3Q16875 520 aaPredicted RBP4.04□□□□□ -1.76
SSB-208ENST00000468600 MZT2AQ6P582 158 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 USP49Q70CQ1 688 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 RFX6Q8HWS3 928 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 SMCR8Q8TEV9 937 aaPredicted RBP4.04□□□□□ -1.76
SSB-208ENST00000468600 GPATCH3Q96I76 525 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 ZNF479Q96JC4 524 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 VPS50Q96JG6 964 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 CPNE7Q9UBL6 633 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 VPS51Q9UID3 782 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 ASAP1Q9ULH1 1129 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 CAPN11Q9UMQ6 739 aa4.04□□□□□ -1.76
SSB-208ENST00000468600 COL15A1P39059 1388 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 PRSS47A8MTI9 375 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 FYB1O15117 783 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 INPPL1O15357 1258 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 TLX3O43711 291 aaPredicted RBP4.03□□□□□ -1.76
SSB-208ENST00000468600 CTNND1O60716 968 aaKnown RBP4.03□□□□□ -1.76
SSB-208ENST00000468600 USP12O75317 370 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 INMTO95050 263 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 U2AF1L5P0DN76 240 aaPredicted RBP4.03□□□□□ -1.76
SSB-208ENST00000468600 ACVR2AP27037 513 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 CPA2P48052 419 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 TXNL4AP83876 142 aaKnown RBP4.03□□□□□ -1.76
SSB-208ENST00000468600 U2AF1Q01081 240 aaKnown RBP eCLIP4.03□□□□□ -1.763e-12■□□□□ 10
SSB-208ENST00000468600 CNGA2Q16280 664 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 C9orf50Q5SZB4 431 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 APOA5Q6Q788 366 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 ZNF793Q6ZN11 406 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 B4GALNT2Q8NHY0 566 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 FAM84BQ96KN1 310 aaPredicted RBP4.03□□□□□ -1.76
SSB-208ENST00000468600 LRGUKQ96M69 825 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 SACM1LQ9NTJ5 587 aa4.03□□□□□ -1.76
SSB-208ENST00000468600 DNAJB11Q9UBS4 358 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms