RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 RPS6KA5O75582 802 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 AKAP3O75969 853 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 ADCY5O95622 1261 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 CHRNA1P02708 482 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 TPM2P07951 284 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 IQCF3P0C7M6 154 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 GHRP10912 638 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 EPB41P11171 864 aaKnown RBP4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 COL6A2P12110 1019 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 KRT13P13646 458 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 DARSP14868 501 aaKnown RBP4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 POU3F2P20265 443 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 ADSSP30520 456 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 CD52P31358 61 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 PSMC2P35998 433 aaKnown RBP4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 ACOT2P49753 483 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 CDK7P50613 346 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 COPB1P53618 953 aaKnown RBP4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 CRYBB1P53674 252 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 CCL23P55773 120 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 TLE2Q04725 743 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 LRRC63Q05C16 580 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 KRT31Q15323 416 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 GPR19Q15760 415 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 CRY1Q16526 586 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 BMT2Q1RMZ1 405 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 TRIM60Q495X7 471 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 COBLL1Q53SF7 1204 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 TCP11X2Q5H9J9 407 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 DCAF17Q5H9S7 520 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 ZNF618Q5T7W0 954 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 ATF7IP2Q5U623 682 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 CDCA2Q69YH5 1023 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 SLFN12LQ6IEE8 588 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 SLC39A4Q6P5W5 647 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 ABHD17CQ6PCB6 329 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 NECAB2Q7Z6G3 386 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 MILR1Q7Z6M3 343 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 SERINC5Q86VE9 423 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 ZNF410Q86VK4 478 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 SESTD1Q86VW0 696 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 FAM114A1Q8IWE2 563 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 TRIM48Q8IWZ4 208 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 FAM186BQ8IYM0 893 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 GPD1LQ8N335 351 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 PPM1KQ8N3J5 372 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 XXYLT1Q8NBI6 393 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 SPC24Q8NBT2 197 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 GOLGA5Q8TBA6 731 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 ALG3Q92685 438 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 CCDC127Q96BQ5 260 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 HVCN1Q96D96 273 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 CNOT6LQ96LI5 555 aaKnown RBP4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 NAP1L5Q96NT1 182 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 FAM213AQ9BRX8 229 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 APOL6Q9BWW8 343 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 RNF38Q9H0F5 515 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 FZD8Q9H461 694 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 ST6GALNAC4Q9H4F1 302 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 THAP9Q9H5L6 903 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 IFT122Q9HBG6 1241 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 SIRT5Q9NXA8 310 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 SAMD15Q9P1V8 674 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 ASH2LQ9UBL3 628 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 MBD1Q9UIS9 605 aaPredicted RBP4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 AGO2Q9UKV8 859 aaKnown RBP4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 DSEQ9UL01 958 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 ST3GAL5Q9UNP4 418 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 TRAF3IP3Q9Y228 551 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 PRKAB1Q9Y478 270 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 KAT6AQ92794 2004 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 EVPLQ92817 2033 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 UBE4BO95155 1302 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 PHLPP2Q6ZVD8 1323 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 WDR81Q562E7 1941 aa4.4□□□□□ -1.7
TMEM39A-204ENST00000468545 ZMYM2Q9UBW7 1377 aa4.4□□□□□ -1.7
TMEM39A-204ENST00000468545 MYH11P35749 1972 aa4.4□□□□□ -1.7
TMEM39A-204ENST00000468545 ZNF233A6NK53 670 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 ZNF561-AS1K7EIQ3 104 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 TEX33O43247 280 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 EXTL3O43909 919 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 TSPAN1O60635 241 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 GNA14O95837 355 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 PTMAP06454 111 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 C8AP07357 584 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 JMJD7P0C870 316 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 TRIM49P0CI25 452 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 TRIM49CP0CI26 452 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 DLATP10515 647 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 CKBP12277 381 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 ZSCAN20P17040 1043 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 ARF4P18085 180 aaPredicted RBP4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 SFPQP23246 707 aaKnown RBP eCLIP4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 CYP2C18P33260 490 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 ABCD1P33897 745 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 TNFSF9P41273 254 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 ZNF75DP51815 510 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 SNRPFP62306 86 aaKnown RBP4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 UBXN1Q04323 297 aa4.4□□□□□ -1.71
TMEM39A-204ENST00000468545 POU5F1BQ06416 359 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms