RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 LNP1A1A4G5 178 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 CACNG3O60359 315 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 TYRP14679 529 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 MXI1P50539 228 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 RAD23BP54727 409 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 MAP7D1Q3KQU3 841 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 EGFLAMQ63HQ2 1017 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 GRAMD4Q6IC98 578 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 KLHDC10Q6PID8 442 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 Q6ZNB5 142 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 TOGARAM2Q6ZUX3 1019 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 FBXL13Q8NEE6 735 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 ERCC4Q92889 916 aaPredicted RBP25.77■■□□□ 1.72
PTCH1-210ENST00000468211 LSM14BQ9BX40 385 aaKnown RBP25.77■■□□□ 1.72
PTCH1-210ENST00000468211 RAB20Q9NX57 234 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 MARK1Q9P0L2 795 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 DNMT3LQ9UJW3 386 aa25.77■■□□□ 1.72
PTCH1-210ENST00000468211 KMT2BQ9UMN6 2715 aaPredicted RBP25.77■■□□□ 1.72
PTCH1-210ENST00000468211 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.76■■□□□ 1.71
PTCH1-210ENST00000468211 PRRT4C9JH25 899 aa25.76■■□□□ 1.71
PTCH1-210ENST00000468211 STC2O76061 302 aa25.76■■□□□ 1.71
PTCH1-210ENST00000468211 PLA2G4AP47712 749 aa25.76■■□□□ 1.71
PTCH1-210ENST00000468211 PMS1P54277 932 aaKnown RBP25.76■■□□□ 1.71
PTCH1-210ENST00000468211 CBWD6Q4V339 395 aa25.76■■□□□ 1.71
PTCH1-210ENST00000468211 CBWD3Q5JTY5 395 aa25.76■■□□□ 1.71
PTCH1-210ENST00000468211 CBWD5Q5RIA9 395 aa25.76■■□□□ 1.71
PTCH1-210ENST00000468211 N4BP2L1Q5TBK1 243 aaPredicted RBP25.76■■□□□ 1.71
PTCH1-210ENST00000468211 CYP2U1Q7Z449 544 aa25.76■■□□□ 1.71
PTCH1-210ENST00000468211 TMEFF1Q8IYR6 380 aa25.76■■□□□ 1.71
PTCH1-210ENST00000468211 ERLEC1Q96DZ1 483 aa25.76■■□□□ 1.71
PTCH1-210ENST00000468211 LSM7Q9UK45 103 aaKnown RBP25.76■■□□□ 1.71
PTCH1-210ENST00000468211 STARD13Q9Y3M8 1113 aa25.76■■□□□ 1.71
PTCH1-210ENST00000468211 CACNA1BQ00975 2339 aa25.76■■□□□ 1.71
PTCH1-210ENST00000468211 A0A1W2PQF6 199 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 C4orf47A7E2U8 309 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 CETN3O15182 167 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 KLKB1P03952 638 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 EPB41P11171 864 aaKnown RBP25.75■■□□□ 1.71
PTCH1-210ENST00000468211 GABRG2P18507 467 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 PTGER3P43115 390 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 ARMCX6Q7L4S7 300 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 PGBD3Q8N328 593 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 KCNV2Q8TDN2 545 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 PIGKQ92643 395 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 BHMTQ93088 406 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 TMEM176AQ96HP8 235 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 GTF3C3Q9Y5Q9 886 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 ADAMTS9Q9P2N4 1935 aa25.75■■□□□ 1.71
PTCH1-210ENST00000468211 CISD3P0C7P0 127 aa25.74■■□□□ 1.71
PTCH1-210ENST00000468211 IRX4P78413 519 aa25.74■■□□□ 1.71
PTCH1-210ENST00000468211 GOLGA8FQ08AF8 430 aa25.74■■□□□ 1.71
PTCH1-210ENST00000468211 GOLGA8DPQ0D2H9 430 aa25.74■■□□□ 1.71
PTCH1-210ENST00000468211 ANKRD40Q6AI12 368 aa25.74■■□□□ 1.71
PTCH1-210ENST00000468211 ZNF276Q8N554 614 aa25.74■■□□□ 1.71
PTCH1-210ENST00000468211 CD248Q9HCU0 757 aa25.74■■□□□ 1.71
PTCH1-210ENST00000468211 TMEM74BQ9NUR3 256 aa25.74■■□□□ 1.71
PTCH1-210ENST00000468211 PLK2Q9NYY3 685 aa25.74■■□□□ 1.71
PTCH1-210ENST00000468211 CLIC5Q9NZA1 410 aa25.74■■□□□ 1.71
PTCH1-210ENST00000468211 WDR35Q9P2L0 1181 aa25.74■■□□□ 1.71
PTCH1-210ENST00000468211 KHNYNO15037 678 aaKnown RBP25.73■■□□□ 1.71
PTCH1-210ENST00000468211 MAP3K13O43283 966 aa25.73■■□□□ 1.71
PTCH1-210ENST00000468211 KCNK5O95279 499 aa25.73■■□□□ 1.71
PTCH1-210ENST00000468211 HOXB2P14652 356 aa25.73■■□□□ 1.71
PTCH1-210ENST00000468211 NTSR1P30989 418 aa25.73■■□□□ 1.71
PTCH1-210ENST00000468211 PSEN1P49768 467 aa25.73■■□□□ 1.71
PTCH1-210ENST00000468211 PREPLQ4J6C6 727 aaPredicted RBP25.73■■□□□ 1.71
PTCH1-210ENST00000468211 ZNF658Q5TYW1 1059 aaPredicted RBP25.73■■□□□ 1.71
PTCH1-210ENST00000468211 ARHGAP17Q68EM7 881 aa25.73■■□□□ 1.71
PTCH1-210ENST00000468211 LPCAT2Q7L5N7 544 aa25.73■■□□□ 1.71
PTCH1-210ENST00000468211 PIGZQ86VD9 579 aa25.73■■□□□ 1.71
PTCH1-210ENST00000468211 ZC3H3Q8IXZ2 948 aaKnown RBP25.73■■□□□ 1.71
PTCH1-210ENST00000468211 ENGASEQ8NFI3 743 aa25.73■■□□□ 1.71
PTCH1-210ENST00000468211 FAXDC2Q96IV6 333 aa25.73■■□□□ 1.71
PTCH1-210ENST00000468211 SPACA7Q96KW9 195 aa25.73■■□□□ 1.71
PTCH1-210ENST00000468211 XPO6Q96QU8 1125 aaKnown RBP25.73■■□□□ 1.71
PTCH1-210ENST00000468211 ASCC3Q8N3C0 2202 aaKnown RBP25.73■■□□□ 1.71
PTCH1-210ENST00000468211 TRIM49BA6NDI0 452 aa25.72■■□□□ 1.71
PTCH1-210ENST00000468211 TULP2O00295 520 aa25.72■■□□□ 1.71
PTCH1-210ENST00000468211 CDX4O14627 284 aaPredicted RBP25.72■■□□□ 1.71
PTCH1-210ENST00000468211 EFEMP1Q12805 493 aa25.72■■□□□ 1.71
PTCH1-210ENST00000468211 DCAF17Q5H9S7 520 aaPredicted RBP25.72■■□□□ 1.71
PTCH1-210ENST00000468211 RAB41Q5JT25 222 aa25.72■■□□□ 1.71
PTCH1-210ENST00000468211 TCERG1LQ5VWI1 586 aa25.72■■□□□ 1.71
PTCH1-210ENST00000468211 KIAA1211LQ6NV74 962 aa25.72■■□□□ 1.71
PTCH1-210ENST00000468211 TRMT11Q7Z4G4 463 aaKnown RBP25.72■■□□□ 1.71
PTCH1-210ENST00000468211 NDRG1Q92597 394 aaKnown RBP25.72■■□□□ 1.71
PTCH1-210ENST00000468211 CALCOCO1Q9P1Z2 691 aa25.72■■□□□ 1.71
PTCH1-210ENST00000468211 RASAL2Q9UJF2 1139 aa25.72■■□□□ 1.71
PTCH1-210ENST00000468211 STX10O60499 249 aa25.71■■□□□ 1.71
PTCH1-210ENST00000468211 HMBSP08397 361 aa25.71■■□□□ 1.71
PTCH1-210ENST00000468211 RALAP11233 206 aa25.71■■□□□ 1.71
PTCH1-210ENST00000468211 PMLP29590 882 aa25.71■■□□□ 1.71
PTCH1-210ENST00000468211 DGKGP49619 791 aa25.71■■□□□ 1.71
PTCH1-210ENST00000468211 COBLL1Q53SF7 1204 aa25.71■■□□□ 1.71
PTCH1-210ENST00000468211 NUDT18Q6ZVK8 323 aa25.71■■□□□ 1.71
PTCH1-210ENST00000468211 TTC39CQ8N584 583 aa25.71■■□□□ 1.71
PTCH1-210ENST00000468211 DEFB119Q8N690 84 aa25.71■■□□□ 1.71
PTCH1-210ENST00000468211 SPATA20Q8TB22 786 aa25.71■■□□□ 1.71
PTCH1-210ENST00000468211 UBXN6Q9BZV1 441 aa25.71■■□□□ 1.71
PTCH1-210ENST00000468211 DNAI2Q9GZS0 605 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms