RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 STXBP5Q5T5C0 1151 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 MSANTD2Q6P1R3 559 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 CMTM8Q8IZV2 173 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 DEFB106AQ8N104 65 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 ACSF2Q96CM8 615 aaPredicted RBP15.9■□□□□ 0.14
SNIP1-202ENST00000468040 PHF7Q9BWX1 381 aaPredicted RBP15.9■□□□□ 0.14
SNIP1-202ENST00000468040 PACSIN1Q9BY11 444 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNIP1-202ENST00000468040 UVRAGQ9P2Y5 699 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 STAP1Q9ULZ2 295 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 NAALADL1Q9UQQ1 740 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 BRWD1Q9NSI6 2320 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 ANAPC1Q9H1A4 1944 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 DESP17661 470 aa15.89■□□□□ 0.13
SNIP1-202ENST00000468040 GBP2P32456 591 aaPredicted RBP15.89■□□□□ 0.13
SNIP1-202ENST00000468040 SLC7A9P82251 487 aa15.89■□□□□ 0.13
SNIP1-202ENST00000468040 KIAA1328Q86T90 577 aa15.89■□□□□ 0.13
SNIP1-202ENST00000468040 RHOT2Q8IXI1 618 aa15.89■□□□□ 0.13
SNIP1-202ENST00000468040 ARL14EPQ8N8R7 260 aaPredicted RBP15.89■□□□□ 0.13
SNIP1-202ENST00000468040 ACRBPQ8NEB7 543 aa15.89■□□□□ 0.13
SNIP1-202ENST00000468040 ZSCAN18Q8TBC5 510 aaPredicted RBP15.89■□□□□ 0.13
SNIP1-202ENST00000468040 MCEEQ96PE7 176 aa15.89■□□□□ 0.13
SNIP1-202ENST00000468040 SMOC2Q9H3U7 446 aa15.89■□□□□ 0.13
SNIP1-202ENST00000468040 PRDM6Q9NQX0 595 aa15.89■□□□□ 0.13
SNIP1-202ENST00000468040 TMEM51Q9NW97 253 aa15.89■□□□□ 0.13
SNIP1-202ENST00000468040 MARCH2Q9P0N8 246 aa15.89■□□□□ 0.13
SNIP1-202ENST00000468040 REXO2Q9Y3B8 237 aaKnown RBP15.89■□□□□ 0.13
SNIP1-202ENST00000468040 NR2E1Q9Y466 385 aa15.89■□□□□ 0.13
SNIP1-202ENST00000468040 C2CD4BA6NLJ0 364 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 MBL2P11226 248 aaPredicted RBP15.88■□□□□ 0.13
SNIP1-202ENST00000468040 LAMP2P13473 410 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 PDGFRAP16234 1089 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 GPD1P21695 349 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 SDC4P31431 198 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 RFC1P35251 1148 aaPredicted RBP15.88■□□□□ 0.13
SNIP1-202ENST00000468040 FLT3P36888 993 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 KPNA1P52294 538 aaPredicted RBP15.88■□□□□ 0.13
SNIP1-202ENST00000468040 VAV2P52735 878 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 EFEMP1Q12805 493 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 SLC25A52Q3SY17 297 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 SYPL2Q5VXT5 272 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 EMC1Q8N766 993 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 TDRD5Q8NAT2 981 aaKnown RBP15.88■□□□□ 0.13
SNIP1-202ENST00000468040 JOSD2Q8TAC2 188 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 DQX1Q8TE96 717 aaKnown RBP15.88■□□□□ 0.13
SNIP1-202ENST00000468040 FNIP1Q8TF40 1166 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 RFFLQ8WZ73 363 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 SMARCD2Q92925 531 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 ARHGEF26Q96DR7 871 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 ZSWIM3Q96MP5 696 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 SERPINB11Q96P15 392 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 SLC22A12Q96S37 553 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 MYADMQ96S97 322 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 DESI2Q9BSY9 194 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 DDX23Q9BUQ8 820 aaKnown RBP15.88■□□□□ 0.13
SNIP1-202ENST00000468040 NUP85Q9BW27 656 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 RNF38Q9H0F5 515 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 CTTNBP2NLQ9P2B4 639 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 EPS15L1Q9UBC2 864 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 LCMT1Q9UIC8 334 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 RASAL2Q9UJF2 1139 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 NUDT5Q9UKK9 219 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 ARHGAP26Q9UNA1 814 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 ADGRG1Q9Y653 693 aa15.88■□□□□ 0.13
SNIP1-202ENST00000468040 EYSQ5T1H1 3165 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 TMEM191CA6NGB0 347 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 DPYSL4O14531 572 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 GJB6O95452 261 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 TBX18O95935 607 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 CCDC175P0C221 793 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 GBP1P32455 592 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 PTPN9P43378 593 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 ZNF143P52747 638 aaPredicted RBP15.87■□□□□ 0.13
SNIP1-202ENST00000468040 RPL7AP62424 266 aaKnown RBP15.87■□□□□ 0.13
SNIP1-202ENST00000468040 COG7P83436 770 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 NNTQ13423 1086 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 TCEAL1Q15170 157 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 DDX42Q86XP3 938 aaKnown RBP eCLIP15.87■□□□□ 0.13
SNIP1-202ENST00000468040 MIB1Q86YT6 1006 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 ARID3BQ8IVW6 561 aaPredicted RBP15.87■□□□□ 0.13
SNIP1-202ENST00000468040 PLCD3Q8N3E9 789 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 ZNF564Q8TBZ8 553 aaPredicted RBP15.87■□□□□ 0.13
SNIP1-202ENST00000468040 ATXN2LQ8WWM7 1075 aaKnown RBP15.87■□□□□ 0.13
SNIP1-202ENST00000468040 RXFP2Q8WXD0 754 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 NT5C3BQ969T7 300 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 ASB16Q96NS5 453 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 CYP2S1Q96SQ9 504 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 NPY6RQ99463 290 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 KCNF1Q9H3M0 494 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 FAM204AQ9H8W3 233 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 KIF9Q9HAQ2 790 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 TDP1Q9NUW8 608 aa15.87■□□□□ 0.13
SNIP1-202ENST00000468040 HBS1LQ9Y450 684 aaKnown RBP15.87■□□□□ 0.13
SNIP1-202ENST00000468040 A0A0A6YYK5 440 aaPredicted RBP15.86■□□□□ 0.13
SNIP1-202ENST00000468040 M0QYT0 321 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 MDM4O15151 490 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 TRUB2O95900 331 aaKnown RBP15.86■□□□□ 0.13
SNIP1-202ENST00000468040 F9P00740 461 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 IGLV3-25P01717 112 aa15.86■□□□□ 0.13
SNIP1-202ENST00000468040 IL9P15248 144 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms