RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 DCLK3Q9C098 648 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 PARD6AQ9NPB6 346 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 DLL3Q9NYJ7 618 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 MARK1Q9P0L2 795 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 KIAA1468Q9P260 1216 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 STRIP2Q9ULQ0 834 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 ALDH1A2O94788 518 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 SETSIPP0DME0 302 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 YWHAGP61981 247 aaKnown RBP eCLIP20.03■□□□□ 0.8
COL7A1-207ENST00000467985 PDE4CQ08493 712 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 MESP2Q0VG99 397 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 CRY1Q16526 586 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 RSPO4Q2I0M5 234 aaPredicted RBP20.03■□□□□ 0.8
COL7A1-207ENST00000467985 EOGTQ5NDL2 527 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 TMEM270Q6UE05 265 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 RSRC2Q7L4I2 434 aaKnown RBP20.03■□□□□ 0.8
COL7A1-207ENST00000467985 TRIM59Q8IWR1 403 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 PPM1KQ8N3J5 372 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 PHTF2Q8N3S3 785 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 CCDC33Q8N5R6 958 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 ALLCQ8N6M5 410 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 NAT16Q8N8M0 369 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 IL17RCQ8NAC3 791 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 BBS2Q9BXC9 721 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 LRRC4Q9HBW1 653 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 SEMA4GQ9NTN9 838 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 NUDT5Q9UKK9 219 aa20.03■□□□□ 0.8
COL7A1-207ENST00000467985 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.03■□□□□ 0.8
COL7A1-207ENST00000467985 NEDD8-MDP1E9PL57 170 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 O00370 1275 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 MDM4O15151 490 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 CACNG3O60359 315 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 STC2O76061 302 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 KLF8O95600 359 aaPredicted RBP20.02■□□□□ 0.8
COL7A1-207ENST00000467985 KIR2DL1P43626 348 aaPredicted RBP20.02■□□□□ 0.8
COL7A1-207ENST00000467985 STX17P56962 302 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 GCNT1Q02742 428 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 EFEMP1Q12805 493 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 KCNH2Q12809 1159 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 STILQ15468 1287 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 ELF2Q15723 593 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 USP39Q53GS9 565 aaKnown RBP20.02■□□□□ 0.8
COL7A1-207ENST00000467985 GRAMD4Q6IC98 578 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 LCLAT1Q6UWP7 414 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 Q6ZNB5 142 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 DGLUCYQ7Z3D6 616 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 KBTBD6Q86V97 674 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 RASSF3Q86WH2 238 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 TERB1Q8NA31 727 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 TXNDC5Q8NBS9 432 aaKnown RBP20.02■□□□□ 0.8
COL7A1-207ENST00000467985 LMO3Q8TAP4 145 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 KCTD13Q8WZ19 329 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 CNOT6LQ96LI5 555 aaKnown RBP20.02■□□□□ 0.8
COL7A1-207ENST00000467985 SRRTQ9BXP5 876 aaKnown RBP20.02■□□□□ 0.8
COL7A1-207ENST00000467985 POLMQ9NP87 494 aaPredicted RBP20.02■□□□□ 0.8
COL7A1-207ENST00000467985 OLA1Q9NTK5 396 aaKnown RBP20.02■□□□□ 0.8
COL7A1-207ENST00000467985 DNAJC17Q9NVM6 304 aaKnown RBP20.02■□□□□ 0.8
COL7A1-207ENST00000467985 PCDHB4Q9Y5E5 795 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 EML5Q05BV3 1969 aa20.02■□□□□ 0.8
COL7A1-207ENST00000467985 RHOBTB1O94844 696 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 EPN2O95208 641 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 AFPP02771 609 aaKnown RBP20.01■□□□□ 0.79
COL7A1-207ENST00000467985 TYRP14679 529 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 TIE1P35590 1138 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 CHKAP35790 457 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 SFTPA1Q8IWL2 248 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 SIX6OS1Q8N1H7 587 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 EHBP1Q8NDI1 1231 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 ULBP1Q9BZM6 244 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 MARCH2Q9P0N8 246 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 RWDD2AQ9UIY3 292 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 RASAL2Q9UJF2 1139 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 CDV3Q9UKY7 258 aaKnown RBP20.01■□□□□ 0.79
COL7A1-207ENST00000467985 PCDHGA5Q9Y5G8 931 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 RALGAPA1Q6GYQ0 2036 aa20.01■□□□□ 0.79
COL7A1-207ENST00000467985 CHRM1P11229 460 aaPredicted RBP20■□□□□ 0.79
COL7A1-207ENST00000467985 CNGA2Q16280 664 aa20■□□□□ 0.79
COL7A1-207ENST00000467985 PLK5Q496M5 336 aa20■□□□□ 0.79
COL7A1-207ENST00000467985 C10orf76Q5T2E6 689 aa20■□□□□ 0.79
COL7A1-207ENST00000467985 ANO7Q6IWH7 933 aa20■□□□□ 0.79
COL7A1-207ENST00000467985 PRR23CQ6ZRP0 262 aa20■□□□□ 0.79
COL7A1-207ENST00000467985 CLEC17AQ6ZS10 378 aa20■□□□□ 0.79
COL7A1-207ENST00000467985 TPGS1Q6ZTW0 290 aa20■□□□□ 0.79
COL7A1-207ENST00000467985 SCML4Q8N228 414 aa20■□□□□ 0.79
COL7A1-207ENST00000467985 ZNF513Q8N8E2 541 aaPredicted RBP20■□□□□ 0.79
COL7A1-207ENST00000467985 CNGB3Q9NQW8 809 aa20■□□□□ 0.79
COL7A1-207ENST00000467985 STARD13Q9Y3M8 1113 aa20■□□□□ 0.79
COL7A1-207ENST00000467985 SGK1O00141 431 aa19.99■□□□□ 0.79
COL7A1-207ENST00000467985 TULP2O00295 520 aa19.99■□□□□ 0.79
COL7A1-207ENST00000467985 ADIGQ0VDE8 80 aa19.99■□□□□ 0.79
COL7A1-207ENST00000467985 CAMK4Q16566 473 aa19.99■□□□□ 0.79
COL7A1-207ENST00000467985 PKDCCQ504Y2 493 aa19.99■□□□□ 0.79
COL7A1-207ENST00000467985 EMC10Q5UCC4 262 aa19.99■□□□□ 0.79
COL7A1-207ENST00000467985 UBA3Q8TBC4 463 aa19.99■□□□□ 0.79
COL7A1-207ENST00000467985 NETO1Q8TDF5 533 aa19.99■□□□□ 0.79
COL7A1-207ENST00000467985 PLD4Q96BZ4 506 aa19.99■□□□□ 0.79
COL7A1-207ENST00000467985 DUSP15Q9H1R2 295 aaPredicted RBP19.99■□□□□ 0.79
COL7A1-207ENST00000467985 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.99■□□□□ 0.79
COL7A1-207ENST00000467985 SDK1Q7Z5N4 2213 aa19.99■□□□□ 0.79
COL7A1-207ENST00000467985 KLKB1P03952 638 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms