RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 MYL4P12829 197 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 FGFR2P21802 821 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 BDNFP23560 247 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 ADRA1DP25100 572 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 YY1P25490 414 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 HTR7P34969 479 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 STT3AP46977 705 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 COPAP53621 1224 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 EIF4A1P60842 406 aaKnown RBP4.42□□□□□ -1.7
VPS50-209ENST00000467326 TXNL4AP83876 142 aaKnown RBP4.42□□□□□ -1.7
VPS50-209ENST00000467326 GPS1Q13098 491 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 RAPGEF1Q13905 1077 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 KCNB1Q14721 858 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 LARS2Q15031 903 aaKnown RBP4.42□□□□□ -1.7
VPS50-209ENST00000467326 MTX3Q5HYI7 312 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 EPHA10Q5JZY3 1008 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 ZNF280DQ6N043 979 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 TMEM65Q6PI78 240 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 CLEC9AQ6UXN8 241 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 DCDC5Q6ZRR9 648 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 KRT28Q7Z3Y7 464 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 GALNT16Q8N428 558 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 FSTL5Q8N475 847 aaPredicted RBP4.42□□□□□ -1.7
VPS50-209ENST00000467326 RNF152Q8N8N0 203 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 C8orf58Q8NAV2 365 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 ATP11CQ8NB49 1132 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 FAM227BQ96M60 508 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 HS6ST2Q96MM7 605 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 SH2D3AQ9BRG2 576 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 MAGEB5Q9BZ81 275 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 ZNF700Q9H0M5 742 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 ARNT2Q9HBZ2 717 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 PDGFCQ9NRA1 345 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 MGAT4CQ9UBM8 478 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 INO80B-WBP1J3KQ70 363 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 ANP32CO43423 234 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 RNF8O76064 485 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 MT-CO3P00414 261 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 MYL3P08590 195 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 KELP23276 732 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 MST1P26927 711 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 ATICP31939 592 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 ARHGAP25P42331 645 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 ZNF268Q14587 947 aaPredicted RBP4.41□□□□□ -1.7
VPS50-209ENST00000467326 SUPT20HL1Q3ZLR7 823 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 TMEM63BQ5T3F8 832 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 SYCP2LQ5T4T6 812 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 MORN5Q5VZ52 161 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 ZNF626Q68DY1 528 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 SLC18B1Q6NT16 456 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 CRTC1Q6UUV9 634 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 KSR2Q6VAB6 950 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 BEND5Q7L4P6 421 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 GLCCI1Q86VQ1 547 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 PNPLA1Q8N8W4 532 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 PJA1Q8NG27 643 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 ADAMTS18Q8TE60 1221 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 TBCBQ99426 244 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 EFHD1Q9BUP0 239 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 COLEC11Q9BWP8 271 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 SLC29A3Q9BZD2 475 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 ZHX3Q9H4I2 956 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 MYO1AQ9UBC5 1043 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 SCINQ9Y6U3 715 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 ZNF804BA4D1E1 1349 aa4.41□□□□□ -1.7
VPS50-209ENST00000467326 COL15A1P39059 1388 aa4.4□□□□□ -1.7
VPS50-209ENST00000467326 WDR91A4D1P6 747 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 APOL1O14791 398 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 NBPF7P0C2Y1 421 aaPredicted RBP4.4□□□□□ -1.71
VPS50-209ENST00000467326 TMEM225BP0DP42 221 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 DEUP1Q05D60 604 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 PMS2P11Q13670 270 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 LONRF1Q17RB8 773 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 AWAT1Q58HT5 328 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 MIS18BP1Q6P0N0 1132 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 USP17L6PQ6QN14 398 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 CNGA4Q8IV77 575 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 P3H2Q8IVL5 708 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 CNPY4Q8N129 248 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 PDILTQ8N807 584 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.4□□□□□ -1.71
VPS50-209ENST00000467326 EDC3Q96F86 508 aaKnown RBP4.4□□□□□ -1.71
VPS50-209ENST00000467326 PKNOX2Q96KN3 472 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 CCDC17Q96LX7 622 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 PAGR1Q9BTK6 254 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 QTRT1Q9BXR0 403 aaKnown RBP4.4□□□□□ -1.71
VPS50-209ENST00000467326 ZBTB26Q9HCK0 441 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 STARD7Q9NQZ5 370 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 KLHL13Q9P2N7 655 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 RNF7Q9UBF6 113 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 ASAP1Q9ULH1 1129 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 RPS6KL1Q9Y6S9 549 aa4.4□□□□□ -1.71
VPS50-209ENST00000467326 ANO9A1A5B4 782 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 AREL1O15033 823 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 ZNF500O60304 480 aaPredicted RBP4.39□□□□□ -1.71
VPS50-209ENST00000467326 CCNT2O60583 730 aaKnown RBP4.39□□□□□ -1.71
VPS50-209ENST00000467326 WDR47O94967 919 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 ARP10275 920 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 IDEP14735 1019 aa4.39□□□□□ -1.71
VPS50-209ENST00000467326 CALRP27797 417 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms