RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 CCSER2Q9H7U1 834 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 TRPV4Q9HBA0 871 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.88■□□□□ 0.13
NPHP4-205ENST00000466897 EPS15L1Q9UBC2 864 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 DNMT3LQ9UJW3 386 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 STAP1Q9ULZ2 295 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 ARHGAP26Q9UNA1 814 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 REXO2Q9Y3B8 237 aaKnown RBP15.88■□□□□ 0.13
NPHP4-205ENST00000466897 A0A0A6YYK5 440 aaPredicted RBP15.87■□□□□ 0.13
NPHP4-205ENST00000466897 C2CD4BA6NLJ0 364 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 BTNL10A8MVZ5 291 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 DPYSL4O14531 572 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 CAPN9O14815 690 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 MTA2O94776 668 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 ABL1P00519 1130 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 IGLV3-25P01717 112 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 HDCP19113 662 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 PTPN9P43378 593 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 KPNA1P52294 538 aaPredicted RBP15.87■□□□□ 0.13
NPHP4-205ENST00000466897 VAV2P52735 878 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 STXBP5Q5T5C0 1151 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 RSRC2Q7L4I2 434 aaKnown RBP15.87■□□□□ 0.13
NPHP4-205ENST00000466897 BNIPLQ7Z465 357 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 DNAAF5Q86Y56 855 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 RHOT2Q8IXI1 618 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 DEFB106AQ8N104 65 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 MAB21L3Q8N8X9 362 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 ING5Q8WYH8 240 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 RFFLQ8WZ73 363 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 EDEM1Q92611 657 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 ACSF2Q96CM8 615 aaPredicted RBP15.87■□□□□ 0.13
NPHP4-205ENST00000466897 CALR3Q96L12 384 aaKnown RBP15.87■□□□□ 0.13
NPHP4-205ENST00000466897 ASB16Q96NS5 453 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 NPY6RQ99463 290 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 PACSIN1Q9BY11 444 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 RNF38Q9H0F5 515 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 KIF9Q9HAQ2 790 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 OBP2AQ9NY56 170 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 LCMT1Q9UIC8 334 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 NAALADL1Q9UQQ1 740 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 NR2E1Q9Y466 385 aa15.87■□□□□ 0.13
NPHP4-205ENST00000466897 SPTBN5Q9NRC6 3674 aaKnown RBP15.86■□□□□ 0.13
NPHP4-205ENST00000466897 FAM170AA1A519 330 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 TMEM191CA6NGB0 347 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 PJA2O43164 708 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 ATMINO43313 823 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-205ENST00000466897 GRAP2O75791 330 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 CKMP06732 381 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 LAMP2P13473 410 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 RFC1P35251 1148 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-205ENST00000466897 FLT3P36888 993 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 AVPR1AP37288 418 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 HADHBP55084 474 aaKnown RBP15.86■□□□□ 0.13
NPHP4-205ENST00000466897 EIF4EBP2Q13542 120 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-205ENST00000466897 SLC25A52Q3SY17 297 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 DCAF6Q58WW2 860 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 C10orf120Q5SQS8 335 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 SYPL2Q5VXT5 272 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 TRNP1Q6NT89 227 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 DCUN1D2Q6PH85 259 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 POTEHQ6S545 545 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 ZNF662Q6ZS27 426 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 DDX42Q86XP3 938 aaKnown RBP eCLIP15.86■□□□□ 0.13
NPHP4-205ENST00000466897 ARL14EPQ8N8R7 260 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-205ENST00000466897 JOSD2Q8TAC2 188 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 ZSCAN18Q8TBC5 510 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-205ENST00000466897 DQX1Q8TE96 717 aaKnown RBP15.86■□□□□ 0.13
NPHP4-205ENST00000466897 ATXN2LQ8WWM7 1075 aaKnown RBP15.86■□□□□ 0.13
NPHP4-205ENST00000466897 SMARCD2Q92925 531 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 E2F7Q96AV8 911 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 ARHGEF26Q96DR7 871 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 ZFRQ96KR1 1074 aaKnown RBP15.86■□□□□ 0.13
NPHP4-205ENST00000466897 ZSWIM3Q96MP5 696 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 SERPINB11Q96P15 392 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 MCEEQ96PE7 176 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 SLC22A12Q96S37 553 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 MYADMQ96S97 322 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 KCNF1Q9H3M0 494 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 SLITRK6Q9H5Y7 841 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 TRPC7Q9HCX4 862 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 PRDM6Q9NQX0 595 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 MARCH2Q9P0N8 246 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 MYO1AQ9UBC5 1043 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 PRKAG3Q9UGI9 489 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 HBS1LQ9Y450 684 aaKnown RBP15.86■□□□□ 0.13
NPHP4-205ENST00000466897 ADGRG1Q9Y653 693 aa15.86■□□□□ 0.13
NPHP4-205ENST00000466897 ENDOD1O94919 500 aa15.85■□□□□ 0.13
NPHP4-205ENST00000466897 IGLV3-27P01718 113 aa15.85■□□□□ 0.13
NPHP4-205ENST00000466897 PDGFRAP16234 1089 aa15.85■□□□□ 0.13
NPHP4-205ENST00000466897 GPD1P21695 349 aa15.85■□□□□ 0.13
NPHP4-205ENST00000466897 SDC4P31431 198 aa15.85■□□□□ 0.13
NPHP4-205ENST00000466897 ZNF143P52747 638 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-205ENST00000466897 RPL7AP62424 266 aaKnown RBP15.85■□□□□ 0.13
NPHP4-205ENST00000466897 COG7P83436 770 aa15.85■□□□□ 0.13
NPHP4-205ENST00000466897 TFF2Q03403 129 aa15.85■□□□□ 0.13
NPHP4-205ENST00000466897 RING1Q06587 406 aa15.85■□□□□ 0.13
NPHP4-205ENST00000466897 ACAP1Q15027 740 aa15.85■□□□□ 0.13
NPHP4-205ENST00000466897 STRADAQ7RTN6 431 aa15.85■□□□□ 0.13
NPHP4-205ENST00000466897 ZDHHC14Q8IZN3 488 aa15.85■□□□□ 0.13
NPHP4-205ENST00000466897 PLCD3Q8N3E9 789 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms