RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 MDM4O15151 490 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 STC2O76061 302 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 NFATC1O95644 943 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 IGLV3-27P01718 113 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 LTFP02788 710 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 GLI1P08151 1106 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 LCP1P13796 627 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 GJA4P35212 333 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 KRT9P35527 623 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 STAT1P42224 750 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 GABRB2P47870 512 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 SOX9P48436 509 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 KPNA1P52294 538 aaPredicted RBP9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 ZNF445P59923 1031 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 TPM4P67936 248 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 COG7P83436 770 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 FANCCQ00597 558 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 AMPD2Q01433 879 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 GOLGA8FQ08AF8 430 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 GOLGA8DPQ0D2H9 430 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 TRIP4Q15650 581 aaPredicted RBP9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 FIGNQ5HY92 759 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 BTBD8Q5XKL5 378 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 TXNDC11Q6PKC3 985 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 MAMSTRQ6ZN01 415 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 FAM217AQ8IXS0 508 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 CLEC4CQ8WTT0 213 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 BAP1Q92560 729 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 PPP1R13BQ96KQ4 1090 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 CPXM1Q96SM3 734 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 IER2Q9BTL4 223 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 EDEM3Q9BZQ6 932 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 TTYH3Q9C0H2 523 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 NACA2Q9H009 215 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 NLRC4Q9NPP4 1024 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 ASNSD1Q9NWL6 643 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 MARCH2Q9P0N8 246 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 NUDT5Q9UKK9 219 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 HBS1LQ9Y450 684 aaKnown RBP9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 GFRA2O00451 464 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 HOXC11O43248 304 aaPredicted RBP9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 GALR2O43603 387 aaPredicted RBP9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 GFPT2O94808 682 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 IGLV3-25P01717 112 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 KLKB1P03952 638 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 CYP1A1P04798 512 aaPredicted RBP9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 CYP17A1P05093 508 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 CHRNB1P11230 501 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 CHRNB2P17787 502 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 CD72P21854 359 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 SCNN1AP37088 669 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 EIF2DP41214 584 aaKnown RBP9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 NOMO3P69849 1222 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 FMO1Q01740 532 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 CDR2Q01850 454 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 EFEMP1Q12805 493 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 NNTQ13423 1086 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 EIF4EBP2Q13542 120 aaPredicted RBP9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 CCINQ13939 588 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 DHCR24Q15392 516 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 PTPN20Q4JDL3 420 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 TMEM196Q5HYL7 178 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 RHBDF2Q6PJF5 856 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 ZDHHC17Q8IUH5 632 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 BBS7Q8IWZ6 715 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 SCUBE3Q8IX30 993 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 DTWD2Q8NBA8 298 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 TMEM35BQ8NCS4 154 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 C1orf131Q8NDD1 294 aaKnown RBP9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 ZNF397Q8NF99 534 aaPredicted RBP9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 PLD4Q96BZ4 506 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 NOX5Q96PH1 765 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 SLC2A13Q96QE2 648 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 SPAG5Q96R06 1193 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 TRIM62Q9BVG3 475 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 DCLK3Q9C098 648 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 CHRDQ9H2X0 955 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 TSPY26PQ9H489 355 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 MARK1Q9P0L2 795 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 TJP2Q9UDY2 1190 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 STOML2Q9UJZ1 356 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 STRIP2Q9ULQ0 834 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 ZNF510Q9Y2H8 683 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 SH3BP1Q9Y3L3 701 aa9.91□□□□□ -0.82
SDCCAG3-208ENST00000466579 A0A0A0MRY4 1105 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 GOLGA6L19H0YKK7 550 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 PIK3R2O00459 728 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 NCAM2O15394 837 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 LATS1O95835 1130 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 SERPINC1P01008 464 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 ERBB2P04626 1255 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 DCNP07585 359 aaKnown RBP9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 MMEP08473 750 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 COL9A1P20849 921 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 OPRD1P41143 372 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 SNX16P57768 344 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 RING1Q06587 406 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 NR1H3Q13133 447 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 UBXN2BQ14CS0 331 aa9.9□□□□□ -0.82
SDCCAG3-208ENST00000466579 DGKKQ5KSL6 1271 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms