RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SMRP1Q8NCR6 262 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 RP9Q8TA86 221 aaKnown RBP5.05□□□□□ -1.6
LRCH3-211ENST00000466054 HIST1H2AAQ96QV6 131 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 TMEM8AQ9HCN3 771 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 ARHGEF3Q9NR81 526 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 SERTAD4Q9NUC0 356 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 DKK3Q9UBP4 350 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 CDC23Q9UJX2 597 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 SLC39A10Q9ULF5 831 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 CA14Q9ULX7 337 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 GABRQQ9UN88 632 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 DRG1Q9Y295 367 aaKnown RBP5.05□□□□□ -1.6
LRCH3-211ENST00000466054 A0A087WV62 115 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 OR2W5A6NFC9 320 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 MYMKA6NI61 221 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 CYSRT1A8MQ03 144 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 F5H423 210 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-211ENST00000466054 FFAR2O15552 330 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 SNX2O60749 519 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 TTLL1O95922 423 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 FESP07332 822 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 NR2F6P10588 404 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 HGFP14210 728 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 MST1P26927 711 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 MPGP29372 298 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 CLCN2P51788 898 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 TPTEP56180 551 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 LY6KQ17RY6 165 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 C10orf62Q5T681 223 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-211ENST00000466054 CAND1Q86VP6 1230 aaKnown RBP5.04□□□□□ -1.6
LRCH3-211ENST00000466054 MBD3L2Q8NHZ7 208 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-211ENST00000466054 R3HDM4Q96D70 268 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 CRB3Q9BUF7 120 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.04□□□□□ -1.6
LRCH3-211ENST00000466054 PCDHAC1Q9H158 963 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 ADAM21Q9UKJ8 722 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 ZMYND8Q9ULU4 1186 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-211ENST00000466054 MAGED2Q9UNF1 606 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-211ENST00000466054 COL15A1P39059 1388 aa5.04□□□□□ -1.6
LRCH3-211ENST00000466054 IGKV2D-30A0A075B6S6 120 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 CCDC187A0A096LP49 1063 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 GLP2RO95838 553 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 RBL1P28749 1068 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 PCSK6P29122 969 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 ICA1Q05084 483 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 NSUN2Q08J23 767 aaKnown RBP eCLIP5.03□□□□□ -1.6
LRCH3-211ENST00000466054 RAB30Q15771 203 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 MIDNQ504T8 468 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 KIAA1161Q6NSJ0 714 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 PARS2Q7L3T8 475 aaKnown RBP5.03□□□□□ -1.6
LRCH3-211ENST00000466054 SKAP1Q86WV1 359 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 ZNF527Q8NB42 609 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 VPS37AQ8NEZ2 397 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 ABHD5Q8WTS1 349 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 POF1BQ8WVV4 589 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 XAGE5Q8WWM1 108 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 MUL1Q969V5 352 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 ZBTB45Q96K62 511 aaPredicted RBP5.03□□□□□ -1.6
LRCH3-211ENST00000466054 DPCDQ9BVM2 203 aaPredicted RBP5.03□□□□□ -1.6
LRCH3-211ENST00000466054 EBF3Q9H4W6 596 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 NKX1-2Q9UD57 310 aaPredicted RBP5.03□□□□□ -1.6
LRCH3-211ENST00000466054 STEAP1Q9UHE8 339 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 ZNF112Q9UJU3 913 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 LRP12Q9Y561 859 aa5.03□□□□□ -1.6
LRCH3-211ENST00000466054 A8MVJ9 347 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 SKAP2O75563 359 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-211ENST00000466054 ARP10275 920 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 NDUFB7P17568 137 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 GKP32189 559 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 CCKARP32238 428 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 PDE1AP54750 535 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 GPS1Q13098 491 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 ATP1A4Q13733 1029 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 ST3GAL2Q16842 350 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 TBC1D25Q3MII6 688 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 RAP1GAP2Q684P5 730 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 ABLIM2Q6H8Q1 611 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 SLC18B1Q6NT16 456 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 USP49Q70CQ1 688 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 ZDHHC17Q8IUH5 632 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 LRRC71Q8N4P6 559 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 PSMD1Q99460 953 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 ARPC5LQ9BPX5 153 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 AS3MTQ9HBK9 375 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 RIMKLBQ9ULI2 386 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 DTNAQ9Y4J8 743 aa5.02□□□□□ -1.61
LRCH3-211ENST00000466054 AGPSO00116 658 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 IFRD1O00458 451 aaPredicted RBP5.01□□□□□ -1.61
LRCH3-211ENST00000466054 EXOC5O00471 708 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 TPD52L2O43399 206 aaKnown RBP5.01□□□□□ -1.61
LRCH3-211ENST00000466054 PMPCBO75439 489 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 EIF3JO75822 258 aaKnown RBP5.01□□□□□ -1.61
LRCH3-211ENST00000466054 VIPP01282 170 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 ELFN1P0C7U0 828 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 CYP2D6P10635 497 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 JUPP14923 745 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 SUMO2P61956 95 aaKnown RBP5.01□□□□□ -1.61
LRCH3-211ENST00000466054 TFF2Q03403 129 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 LAMB3Q13751 1172 aa5.01□□□□□ -1.61
LRCH3-211ENST00000466054 PUM3Q15397 648 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms