RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 DNASE2BQ8WZ79 361 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 FOXJ1Q92949 421 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 CCDC127Q96BQ5 260 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 P2RY11Q96G91 374 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 BBS2Q9BXC9 721 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 KLF16Q9BXK1 252 aaPredicted RBP12.45□□□□□ -0.42
CNOT4-208ENST00000465721 ZDHHC5Q9C0B5 715 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 TNMDQ9H2S6 317 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 CCDC86Q9H6F5 360 aaKnown RBP12.45□□□□□ -0.42
CNOT4-208ENST00000465721 VRTNQ9H8Y1 702 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 COMMD8Q9NX08 183 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 PCOLCE2Q9UKZ9 415 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 UBE4BO95155 1302 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 GFRA2O00451 464 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 NDUFS2O75306 463 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 AP1G2O75843 785 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 BEST1O76090 585 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 TBX18O95935 607 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 CISD3P0C7P0 127 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 CCDC130P13994 396 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 MAOBP27338 520 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 ATICP31939 592 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 CYP2J2P51589 502 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 CDH8P55286 799 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 CEBPZQ03701 1054 aaKnown RBP12.44□□□□□ -0.42
CNOT4-208ENST00000465721 SYCP2LQ5T4T6 812 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 ERICH6BQ5W0A0 696 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 SCARA5Q6ZMJ2 495 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 SLCO6A1Q86UG4 719 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 BAHD1Q8TBE0 780 aaPredicted RBP12.44□□□□□ -0.42
CNOT4-208ENST00000465721 MDM1Q8TC05 714 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 ZNF507Q8TCN5 953 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 PLEKHO2Q8TD55 490 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 SCFD1Q8WVM8 642 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 SYAP1Q96A49 352 aaPredicted RBP12.44□□□□□ -0.42
CNOT4-208ENST00000465721 XPO6Q96QU8 1125 aaKnown RBP12.44□□□□□ -0.42
CNOT4-208ENST00000465721 SMOQ99835 787 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 MED10Q9BTT4 135 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 NACA2Q9H009 215 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 SDCBP2Q9H190 292 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 CYLDQ9NQC7 956 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 KBTBD4Q9NVX7 518 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 OSER1Q9NX31 292 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 USP36Q9P275 1121 aaKnown RBP12.44□□□□□ -0.42
CNOT4-208ENST00000465721 NFE2L3Q9Y4A8 694 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 PCDHB9Q9Y5E1 797 aa12.44□□□□□ -0.42
CNOT4-208ENST00000465721 ARID1BQ8NFD5 2236 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-208ENST00000465721 ATMQ13315 3056 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 A0A1B0GTW7 788 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 MEI4A8MW99 385 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 WASH3PC4AMC7 463 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 CLIC2O15247 247 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 ZBTB24O43167 697 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-208ENST00000465721 GNSP15586 552 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 CD6P30203 668 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 DGKGP49619 791 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 CASP4P49662 377 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 BNC1Q01954 994 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 EHHADHQ08426 723 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 TRPC3Q13507 836 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 ZNF699Q32M78 642 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 FUT11Q495W5 492 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 WDR45BQ5MNZ6 344 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 FAM26FQ5R3K3 315 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 SDE2Q6IQ49 451 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 Q6ZNB5 142 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 TPGS1Q6ZTW0 290 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 GPRIN1Q7Z2K8 1008 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 METTL3Q86U44 580 aaKnown RBP12.43□□□□□ -0.42
CNOT4-208ENST00000465721 ZCCHC9Q8N567 271 aaKnown RBP12.43□□□□□ -0.42
CNOT4-208ENST00000465721 XXYLT1Q8NBI6 393 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 ELMO3Q96BJ8 720 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 TOE1Q96GM8 510 aaKnown RBP12.43□□□□□ -0.42
CNOT4-208ENST00000465721 BBC3Q96PG8 261 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-208ENST00000465721 USP28Q96RU2 1077 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 MKRN2Q9H000 416 aaKnown RBP12.43□□□□□ -0.42
CNOT4-208ENST00000465721 IL21RQ9HBE5 538 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 CSNK1G1Q9HCP0 422 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 TLR8Q9NR97 1041 aaKnown RBP12.43□□□□□ -0.42
CNOT4-208ENST00000465721 TOR4AQ9NXH8 423 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 WSB2Q9NYS7 404 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-208ENST00000465721 WDR35Q9P2L0 1181 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 HMGXB4Q9UGU5 601 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 APOBEC2Q9Y235 224 aaKnown RBP12.43□□□□□ -0.42
CNOT4-208ENST00000465721 RAXQ9Y2V3 346 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 MGAQ8IWI9 3026 aa12.43□□□□□ -0.42
CNOT4-208ENST00000465721 COL5A1P20908 1838 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-208ENST00000465721 TENM4Q6N022 2769 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 KCNJ18B7U540 433 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 CYP26A1O43174 497 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 DKK1O94907 266 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 VNN1O95497 513 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 ZNF883P0CG24 379 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 NCAM1P13591 858 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 ASIC1P78348 528 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 ORC1Q13415 861 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 CUL4AQ13619 759 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 ENPP2Q13822 863 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 SLC39A14Q15043 492 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 CNNM4Q6P4Q7 775 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms