RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 GSDMBQ8TAX9 411 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 BICD2Q8TD16 824 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 ANKRD49Q8WVL7 239 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 TBC1D5Q92609 795 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 RPL36ALQ969Q0 106 aaKnown RBP3.64□□□□□ -1.83
SNX4-202ENST00000465505 RSRC1Q96IZ7 334 aaKnown RBP3.64□□□□□ -1.83
SNX4-202ENST00000465505 HIC2Q96JB3 615 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 CAMKK2Q96RR4 588 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 SLC39A3Q9BRY0 314 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 QTRT1Q9BXR0 403 aaKnown RBP3.64□□□□□ -1.83
SNX4-202ENST00000465505 SLC13A1Q9BZW2 595 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 SLC7A5P2Q9GIP4 190 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 TINAGL1Q9GZM7 467 aaPredicted RBP3.64□□□□□ -1.83
SNX4-202ENST00000465505 NACA2Q9H009 215 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 SIK2Q9H0K1 926 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 BHMT2Q9H2M3 363 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 MRPL46Q9H2W6 279 aaKnown RBP3.64□□□□□ -1.83
SNX4-202ENST00000465505 DBNDD1Q9H9R9 158 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 ZNF304Q9HCX3 659 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 SLAMF7Q9NQ25 335 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 AIPL1Q9NZN9 384 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.64□□□□□ -1.83
SNX4-202ENST00000465505 HERC5Q9UII4 1024 aaKnown RBP3.64□□□□□ -1.83
SNX4-202ENST00000465505 ZDHHC8Q9ULC8 765 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 SUFUQ9UMX1 484 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 KIF3AQ9Y496 699 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 PCDHGB3Q9Y5G1 929 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 TNKSO95271 1327 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 PRDM2Q13029 1718 aa3.64□□□□□ -1.83
SNX4-202ENST00000465505 NINLQ9Y2I6 1382 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 ATAD2BQ9ULI0 1458 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 FSD2A1L4K1 749 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 PPP6CO00743 305 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 MCF2LO15068 1137 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 SPTLC2O15270 562 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 PIP5K1CO60331 668 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 TMCC2O75069 709 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 ZBED4O75132 1171 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 KATNA1O75449 491 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 NXPH3O95157 252 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 GZMAP12544 262 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 PDCP20941 246 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 CERS1P27544 350 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 CTGFP29279 349 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 MPGP29372 298 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 STT3AP46977 705 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 ALDH9A1P49189 494 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 HK3P52790 923 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 RWDD2BP57060 319 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 TUBA4AP68366 448 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 STK3Q13188 491 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 KLF9Q13886 244 aaPredicted RBP3.63□□□□□ -1.83
SNX4-202ENST00000465505 RASA2Q15283 850 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 CLPPQ16740 277 aaPredicted RBP3.63□□□□□ -1.83
SNX4-202ENST00000465505 SHROOM1Q2M3G4 852 aaPredicted RBP3.63□□□□□ -1.83
SNX4-202ENST00000465505 CEP78Q5JTW2 689 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 AARS2Q5JTZ9 985 aaKnown RBP3.63□□□□□ -1.83
SNX4-202ENST00000465505 ZNF618Q5T7W0 954 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 AP1ARQ63HQ0 302 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 NXNQ6DKJ4 435 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 TOGARAM2Q6ZUX3 1019 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 YTHDF3Q7Z739 585 aaKnown RBP3.63□□□□□ -1.83
SNX4-202ENST00000465505 DGKHQ86XP1 1220 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 ZNF354CQ86Y25 554 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 PRR18Q8N4B5 295 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.63□□□□□ -1.83
SNX4-202ENST00000465505 ZNF606Q8WXB4 792 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 TNPO1Q92973 898 aaKnown RBP3.63□□□□□ -1.83
SNX4-202ENST00000465505 ZBTB9Q96C00 473 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 HVCN1Q96D96 273 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 CFAP36Q96G28 342 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 TIGD1Q96MW7 591 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 TSGA13Q96PP4 275 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 ZNHIT6Q9NWK9 470 aaKnown RBP3.63□□□□□ -1.83
SNX4-202ENST00000465505 DLL3Q9NYJ7 618 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 SH3BP4Q9P0V3 963 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 SEPT10Q9P0V9 454 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 ZNF112Q9UJU3 913 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 MRPL11Q9Y3B7 192 aaKnown RBP3.63□□□□□ -1.83
SNX4-202ENST00000465505 LRRFIP2Q9Y608 721 aaKnown RBP3.63□□□□□ -1.83
SNX4-202ENST00000465505 KANK1Q14678 1352 aa3.63□□□□□ -1.83
SNX4-202ENST00000465505 FNDC1Q4ZHG4 1894 aaPredicted RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 H0YIZ8 118 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 MYO1FO00160 1098 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 CASQ2O14958 399 aaPredicted RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 SLC16A6O15403 523 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 PLOD3O60568 738 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 MOSPD3O75425 235 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 BAG4O95429 457 aaKnown RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 CYP2D6P10635 497 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 EPHB2P29323 1055 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 PTGER1P34995 402 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 LIPAP38571 399 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 PRPHP41219 470 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 PPM1FP49593 454 aaPredicted RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 ZNF134P52741 427 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 TPD52P55327 224 aaPredicted RBP3.62□□□□□ -1.83
SNX4-202ENST00000465505 SP2Q02086 613 aa3.62□□□□□ -1.83
SNX4-202ENST00000465505 MECOMQ03112 1051 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms