RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 IFNAR2P48551 515 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 SNX16P57768 344 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 RUNX3Q13761 415 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 ITPRIPL2Q3MIP1 535 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 Q6ZNB5 142 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 FAM183BPQ6ZVS7 135 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 RSRC2Q7L4I2 434 aaKnown RBP21.26■□□□□ 0.99
SKA3-205ENST00000465471 MIB1Q86YT6 1006 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 CSGALNACT1Q8TDX6 532 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 IPO4Q8TEX9 1081 aaKnown RBP21.26■□□□□ 0.99
SKA3-205ENST00000465471 ATP2A3Q93084 1043 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 PBXIP1Q96AQ6 731 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 CHFRQ96EP1 664 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 MSANTD3Q96H12 275 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 SHDQ96IW2 340 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 LRFN3Q9BTN0 628 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 TRIM62Q9BVG3 475 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 RBSNQ9H1K0 784 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 LINC00597Q9H2U6 94 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 EBF3Q9H4W6 596 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 RASAL2Q9UJF2 1139 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 PIAS3Q9Y6X2 628 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 KMT2EQ8IZD2 1858 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 SLC9A3R1O14745 358 aaPredicted RBP21.25■□□□□ 0.99
SKA3-205ENST00000465471 GYPCP04921 128 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 GLI1P08151 1106 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 SCNN1AP37088 669 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 COG7P83436 770 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 GOLGA8FQ08AF8 430 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 GOLGA8DPQ0D2H9 430 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 NAA35Q5VZE5 725 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 TPRG1Q6ZUI0 275 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 ZDHHC17Q8IUH5 632 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 FBXL6Q8N531 539 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 TTC16Q8NEE8 873 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 ZNF397Q8NF99 534 aaPredicted RBP21.25■□□□□ 0.99
SKA3-205ENST00000465471 RNF139Q8WU17 664 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 GOLGA1Q92805 767 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 OTUB2Q96DC9 234 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 SLC2A13Q96QE2 648 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 AGPAT1Q99943 283 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 C8orf33Q9H7E9 229 aaPredicted RBP21.25■□□□□ 0.99
SKA3-205ENST00000465471 ECT2Q9H8V3 914 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 TBC1D17Q9HA65 648 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 POPDC2Q9HBU9 364 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 TBC1D14Q9P2M4 693 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 STRIP2Q9ULQ0 834 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 CAPN11Q9UMQ6 739 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 SH3BP1Q9Y3L3 701 aa21.25■□□□□ 0.99
SKA3-205ENST00000465471 ZNF318Q5VUA4 2279 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 AP5Z1O43299 807 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 IRF1P10914 325 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 CTHP32929 405 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 YWHAZP63104 245 aaKnown RBP21.24■□□□□ 0.99
SKA3-205ENST00000465471 CENPCQ03188 943 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 TAF5Q15542 800 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 ASIC2Q16515 512 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 CLEC16AQ2KHT3 1053 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 SFMBT2Q5VUG0 894 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 SLC26A9Q7LBE3 791 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 ERICH1Q86X53 443 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 VSTM4Q8IW00 320 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 BBS7Q8IWZ6 715 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 ADGRG2Q8IZP9 1017 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 ZNF687Q8N1G0 1237 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 CPA5Q8WXQ8 436 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 SYN2Q92777 582 aaPredicted RBP21.24■□□□□ 0.99
SKA3-205ENST00000465471 FAM149B1Q96BN6 582 aa21.24■□□□□ 0.99
SKA3-205ENST00000465471 HBS1LQ9Y450 684 aaKnown RBP21.24■□□□□ 0.99
SKA3-205ENST00000465471 KANSL1LA0AUZ9 987 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 SPECC1L-ADORA2AF8WAN1 911 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 SCAMP3O14828 347 aaKnown RBP21.23■□□□□ 0.99
SKA3-205ENST00000465471 HSF2BPO75031 334 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 NFATC1O95644 943 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 IGLV3-27P01718 113 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 NCAM1P13591 858 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 MMP8P22894 467 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 SOX9P48436 509 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 ZBED6P86452 979 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 SLC6A3Q01959 620 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 TRIP4Q15650 581 aaPredicted RBP21.23■□□□□ 0.99
SKA3-205ENST00000465471 EFHC1Q5JVL4 640 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 SPECC1LQ69YQ0 1117 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 C1orf228Q6PIY5 440 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 TOGARAM2Q6ZUX3 1019 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 RALGPS2Q86X27 583 aaPredicted RBP21.23■□□□□ 0.99
SKA3-205ENST00000465471 XYLT1Q86Y38 959 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 CPA6Q8N4T0 437 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 DQX1Q8TE96 717 aaKnown RBP21.23■□□□□ 0.99
SKA3-205ENST00000465471 PLD4Q96BZ4 506 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 C18orf8Q96DM3 657 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 NUCKS1Q9H1E3 243 aaKnown RBP21.23■□□□□ 0.99
SKA3-205ENST00000465471 SYNCQ9H7C4 482 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 SFMBT1Q9UHJ3 866 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 NAALADL1Q9UQQ1 740 aa21.23■□□□□ 0.99
SKA3-205ENST00000465471 MIA3Q5JRA6 1907 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 SLC12A8A0AV02 714 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 MAN2B1O00754 1011 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 IGLV3-25P01717 112 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 KLKB1P03952 638 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms