RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 PPP3CCP48454 512 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 TRAPPC10P48553 1259 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 DGKGP49619 791 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 CCT8P50990 548 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 KCNH2Q12809 1159 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 STARD3Q14849 445 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 ANKRD1Q15327 319 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 PREPLQ4J6C6 727 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-214ENST00000465269 HECTD3Q5T447 861 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 ARHGAP40Q5TG30 622 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 METTL3Q86U44 580 aaKnown RBP15.87■□□□□ 0.13
HDAC6-214ENST00000465269 MYCBPAPQ8TBZ2 947 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 FGF11Q92914 225 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 SIPA1Q96FS4 1042 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 CDK5RAP3Q96JB5 506 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 C8orf48Q96LL4 319 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 MRPL45Q9BRJ2 306 aaKnown RBP15.87■□□□□ 0.13
HDAC6-214ENST00000465269 PDE11AQ9HCR9 933 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 KCND2Q9NZV8 630 aa15.87■□□□□ 0.13
HDAC6-214ENST00000465269 SPTAN1Q13813 2472 aaKnown RBP15.87■□□□□ 0.13
HDAC6-214ENST00000465269 VWA3AA6NCI4 1184 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 ENC1O14682 589 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 YWHAQP27348 245 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 ACSL1P33121 698 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 HNF1BP35680 557 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 COPAP53621 1224 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 RBP5P82980 135 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 MCM6Q14566 821 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 RTP5Q14D33 572 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 SLFN12LQ6IEE8 588 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 LIMS2Q7Z4I7 341 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 ERICH1Q86X53 443 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 BRSK2Q8IWQ3 736 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 FBXO18Q8NFZ0 1043 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 TMEM176AQ96HP8 235 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 XPO6Q96QU8 1125 aaKnown RBP15.86■□□□□ 0.13
HDAC6-214ENST00000465269 KCNK16Q96T55 309 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 TEP1Q99973 2627 aaKnown RBP15.86■□□□□ 0.13
HDAC6-214ENST00000465269 NOTCH2Q04721 2471 aa15.86■□□□□ 0.13
HDAC6-214ENST00000465269 PCDHGA12O60330 932 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 RFPL3O75679 317 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 KRT18P05783 430 aaKnown RBP15.85■□□□□ 0.13
HDAC6-214ENST00000465269 PRKCHP24723 683 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 DDIT3P35638 169 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 GEN1Q17RS7 908 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 NT5DC4Q86YG4 428 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 CCDC83Q8IWF9 413 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 OR5B17Q8NGF7 314 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 SORCS1Q8WY21 1168 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 PRCCQ92733 491 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-214ENST00000465269 IGSF8Q969P0 613 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 HPDLQ96IR7 371 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 CNDP2Q96KP4 475 aaKnown RBP15.85■□□□□ 0.13
HDAC6-214ENST00000465269 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.85■□□□□ 0.13
HDAC6-214ENST00000465269 NUP58Q9BVL2 599 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 B3GNT5Q9BYG0 378 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 BLOC1S4Q9NUP1 217 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 RBAKQ9NYW8 714 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-214ENST00000465269 ITGA11Q9UKX5 1188 aa15.85■□□□□ 0.13
HDAC6-214ENST00000465269 GFRA2O00451 464 aa15.84■□□□□ 0.13
HDAC6-214ENST00000465269 EPB41L2O43491 1005 aaKnown RBP15.84■□□□□ 0.13
HDAC6-214ENST00000465269 OXTRP30559 389 aa15.84■□□□□ 0.13
HDAC6-214ENST00000465269 PRPHP41219 470 aa15.84■□□□□ 0.13
HDAC6-214ENST00000465269 CTSKP43235 329 aa15.84■□□□□ 0.13
HDAC6-214ENST00000465269 FBXL19Q6PCT2 694 aa15.84■□□□□ 0.13
HDAC6-214ENST00000465269 NUP93Q8N1F7 819 aa15.84■□□□□ 0.13
HDAC6-214ENST00000465269 CACTINQ8WUQ7 758 aaKnown RBP15.84■□□□□ 0.13
HDAC6-214ENST00000465269 MMS19Q96T76 1030 aa15.84■□□□□ 0.13
HDAC6-214ENST00000465269 LGMNQ99538 433 aa15.84■□□□□ 0.13
HDAC6-214ENST00000465269 NRSN2Q9GZP1 204 aa15.84■□□□□ 0.13
HDAC6-214ENST00000465269 NACA2Q9H009 215 aa15.84■□□□□ 0.13
HDAC6-214ENST00000465269 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.84■□□□□ 0.13
HDAC6-214ENST00000465269 EHD2Q9NZN4 543 aa15.84■□□□□ 0.13
HDAC6-214ENST00000465269 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-214ENST00000465269 TP53BP1Q12888 1972 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-214ENST00000465269 CAPN8A6NHC0 703 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 MDM4O15151 490 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 TBCAO75347 108 aaKnown RBP15.83■□□□□ 0.12
HDAC6-214ENST00000465269 FSBPO95073 299 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 LDOC1O95751 146 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-214ENST00000465269 ACADMP11310 421 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 C6P13671 934 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 WARSP23381 471 aaKnown RBP15.83■□□□□ 0.12
HDAC6-214ENST00000465269 ACADVLP49748 655 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 TEAD4Q15561 434 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 MAPRE1Q15691 268 aaKnown RBP15.83■□□□□ 0.12
HDAC6-214ENST00000465269 PRICKLE2Q7Z3G6 844 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 SFR1Q86XK3 245 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 EID2Q8N6I1 236 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 BIRC7Q96CA5 298 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 CEP295NLQ96MC4 621 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 PCIF1Q9H4Z3 704 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 TBC1D7Q9P0N9 293 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 THAP10Q9P2Z0 257 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-214ENST00000465269 DACH1Q9UI36 760 aa15.83■□□□□ 0.12
HDAC6-214ENST00000465269 TLN1Q9Y490 2541 aaKnown RBP15.83■□□□□ 0.12
HDAC6-214ENST00000465269 NBPF19A0A087WUL8 3843 aa15.82■□□□□ 0.12
HDAC6-214ENST00000465269 SYNCRIPO60506 623 aaKnown RBP15.82■□□□□ 0.12
HDAC6-214ENST00000465269 IGLV3-19P01714 112 aa15.82■□□□□ 0.12
HDAC6-214ENST00000465269 TMEM191BP0C7N4 346 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms