RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SLC4A11Q8NBS3 891 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 KCTD6Q8NC69 237 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 ICA1LQ8NDH6 482 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 JOSD2Q8TAC2 188 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 PIWIL2Q8TC59 973 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 MIPOL1Q8TD10 442 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 ACMSDQ8TDX5 336 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 ZFRQ96KR1 1074 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 C20orf27Q9GZN8 174 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 Q9H521 79 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 SUDS3Q9H7L9 328 aaPredicted RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 ZNF395Q9H8N7 513 aaPredicted RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 PLAC1Q9HBJ0 212 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 PXMP2Q9NR77 195 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 SMYD2Q9NRG4 433 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 TMOD2Q9NZR1 351 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 C6orf203Q9P0P8 240 aaPredicted RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 APOBEC2Q9Y235 224 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 MYH9P35579 1960 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 H3BNX3 289 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 CYB561D2O14569 222 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 MAFGO15525 162 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 STRNO43815 780 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 TBC1D12O60347 775 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 SIN3BO75182 1162 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 TRUB2O95900 331 aaKnown RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 CCDC166P0CW27 439 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 CSH1P0DML2 217 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 CSH2P0DML3 217 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 IMPDH2P12268 514 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 MYCLP12524 364 aaPredicted RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 RAG1P15918 1043 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 FDFT1P37268 417 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 MAGEA3P43357 314 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 NAMPTP43490 491 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 TGFB2P61812 414 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 FOLH1Q04609 750 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 BMPR2Q13873 1038 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 TRIP10Q15642 601 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 ZYXQ15942 572 aaKnown RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 FASTKD1Q53R41 847 aaKnown RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 KCNT1Q5JUK3 1230 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 ZBTB41Q5SVQ8 909 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 TEDDM1Q5T9Z0 273 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 DENND1BQ6P3S1 775 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 POTEAQ6S8J7 498 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 CYS1Q717R9 158 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 TRMT1LQ7Z2T5 733 aaKnown RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 KBTBD6Q86V97 674 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 CAND1Q86VP6 1230 aaKnown RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 KIAA0319LQ8IZA0 1049 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 NDUFAF2Q8N183 169 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 GSDMBQ8TAX9 411 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 FAM151AQ8WW52 585 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 TFAP2BQ92481 460 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 CMTM5Q96DZ9 223 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 MPP4Q96JB8 637 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 PRMT6Q96LA8 375 aaPredicted RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 ZNF778Q96MU6 729 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 KCNK16Q96T55 309 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 MRPS26Q9BYN8 205 aaKnown RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 SLC13A1Q9BZW2 595 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 KLC2Q9H0B6 622 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 SMYD3Q9H7B4 428 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 USP29Q9HBJ7 922 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 CISHQ9NSE2 258 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 PPP1R1BQ9UD71 204 aaPredicted RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 SEPT9Q9UHD8 586 aaPredicted RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 POMPQ9Y244 141 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 DNAJC16Q9Y2G8 782 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 DTNAQ9Y4J8 743 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 HMX2A2RU54 273 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 VILLO15195 856 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 WDR46O15213 610 aaKnown RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 MED7O43513 233 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 GLRA3O75311 464 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 AVILO75366 819 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 GSRP00390 522 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 SERPINE1P05121 402 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 FAM200BP0CF97 657 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 FGF3P11487 239 aaPredicted RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 ITGAXP20702 1163 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 GRK2P25098 689 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 MIPP30301 263 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 ERFP50548 548 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 EPHB1P54762 984 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 PSMC1P62191 440 aaKnown RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 RPS6P62753 249 aaKnown RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 PRKCEQ02156 737 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 CREB5Q02930 508 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 DEUP1Q05D60 604 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 TBL3Q12788 808 aaKnown RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 TTLL12Q14166 644 aaPredicted RBP7.55□□□□□ -1.2
USP48-206ENST00000464577 EMC2Q15006 297 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 USP41Q3LFD5 358 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.55□□□□□ -1.2
USP48-206ENST00000464577 HSP90AA5PQ58FG0 334 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 RALGPS1Q5JS13 557 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 KLC3Q6P597 504 aa7.55□□□□□ -1.2
USP48-206ENST00000464577 FBXL19Q6PCT2 694 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms