RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PNMA6AP0CW24 399 aaPredicted RBP13.6□□□□□ -0.23
XRN1-203ENST00000463916 DAOAP59103 153 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 BSPRYQ5W0U4 402 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 ZC3H14Q6PJT7 736 aaKnown RBP13.6□□□□□ -0.23
XRN1-203ENST00000463916 ENOSF1Q7L5Y1 443 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 SIX6OS1Q8N1H7 587 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 ARHGAP18Q8N392 663 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 RPLP0P6Q8NHW5 317 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 ATRIPQ8WXE1 791 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 SHC3Q92529 594 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 MARCH2Q9P0N8 246 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 CYTH4Q9UIA0 394 aa13.6□□□□□ -0.23
XRN1-203ENST00000463916 PTPRZ1P23471 2315 aaPredicted RBP13.6□□□□□ -0.23
XRN1-203ENST00000463916 LILRB5O75023 590 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 PAPSS2O95340 614 aaPredicted RBP13.59□□□□□ -0.23
XRN1-203ENST00000463916 USP8P40818 1118 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 STILQ15468 1287 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 ANO4Q32M45 955 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 HEATR6Q6AI08 1181 aaKnown RBP13.59□□□□□ -0.23
XRN1-203ENST00000463916 RSRC2Q7L4I2 434 aaKnown RBP13.59□□□□□ -0.23
XRN1-203ENST00000463916 ETFBKMTQ8IXQ9 262 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 PHTF2Q8N3S3 785 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 SUMF1Q8NBK3 374 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 CNGB3Q9NQW8 809 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 TMEM63CQ9P1W3 806 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 DNAJC12Q9UKB3 198 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 CHURC1-FNTBB4DL54 471 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 FOXN3O00409 490 aaPredicted RBP13.59□□□□□ -0.23
XRN1-203ENST00000463916 LMNAP02545 664 aaKnown RBP13.59□□□□□ -0.23
XRN1-203ENST00000463916 CHRM1P11229 460 aaPredicted RBP13.59□□□□□ -0.23
XRN1-203ENST00000463916 GNA15P30679 374 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 PXNP49023 591 aaPredicted RBP13.59□□□□□ -0.23
XRN1-203ENST00000463916 FNTBP49356 437 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 SEC13P55735 322 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 GAD2Q05329 585 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 FBXO43Q4G163 708 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 C2orf27AQ580R0 203 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 EMC10Q5UCC4 262 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 CDKAL1Q5VV42 579 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 BTBD8Q5XKL5 378 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 TPGS1Q6ZTW0 290 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 TADA2BQ86TJ2 420 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 SCUBE3Q8IX30 993 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 CDK5RAP1Q96SZ6 601 aaKnown RBP13.59□□□□□ -0.23
XRN1-203ENST00000463916 PNKPQ96T60 521 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 MIS12Q9H081 205 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 FANCLQ9NW38 375 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 TAB2Q9NYJ8 693 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 SFMBT1Q9UHJ3 866 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 DCHS1Q96JQ0 3298 aa13.59□□□□□ -0.23
XRN1-203ENST00000463916 FAM186AA6NE01 2351 aa13.58□□□□□ -0.23
XRN1-203ENST00000463916 GVINP1Q7Z2Y8 2422 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 SLC12A8A0AV02 714 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 HOXC11O43248 304 aaPredicted RBP13.58□□□□□ -0.24
XRN1-203ENST00000463916 THAP12O43422 761 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 TULP3O75386 442 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 KAT7O95251 611 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 MBD3O95983 291 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 RPL34P49207 117 aaKnown RBP13.58□□□□□ -0.24
XRN1-203ENST00000463916 COG7P83436 770 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 KDSRQ06136 332 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 GOLGA8FQ08AF8 430 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 GOLGA8DPQ0D2H9 430 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 SRSF5Q13243 272 aaKnown RBP13.58□□□□□ -0.24
XRN1-203ENST00000463916 PPP2R5DQ14738 602 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 SASS6Q6UVJ0 657 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 SCML4Q8N228 414 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 WDTC1Q8N5D0 677 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 BHMTQ93088 406 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 HSFY1Q96LI6 401 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 FAM126AQ9BYI3 521 aaPredicted RBP13.58□□□□□ -0.24
XRN1-203ENST00000463916 SEMA4AQ9H3S1 761 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 ZDHHC4Q9NPG8 344 aa13.58□□□□□ -0.24
XRN1-203ENST00000463916 LSM7Q9UK45 103 aaKnown RBP13.58□□□□□ -0.24
XRN1-203ENST00000463916 AGO1Q9UL18 857 aaKnown RBP13.58□□□□□ -0.24
XRN1-203ENST00000463916 A0A0A0MRY4 1105 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 PES1O00541 588 aaKnown RBP13.57□□□□□ -0.24
XRN1-203ENST00000463916 HRO43593 1189 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 FYNP06241 537 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 EEF1GP26641 437 aaKnown RBP13.57□□□□□ -0.24
XRN1-203ENST00000463916 CORO1AP31146 461 aaKnown RBP13.57□□□□□ -0.24
XRN1-203ENST00000463916 CLCN1P35523 988 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 EIF2DP41214 584 aaKnown RBP13.57□□□□□ -0.24
XRN1-203ENST00000463916 CCDC183Q5T5S1 534 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 FMNL3Q8IVF7 1028 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 USP33Q8TEY7 942 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 EXOC4Q96A65 974 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 VPS16Q9H269 839 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 ARHGEF4Q9NR80 690 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 ST7Q9NRC1 585 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 OTOGLQ3ZCN5 2332 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 KIAA1549LQ6ZVL6 1849 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 NEDD8-MDP1E9PL57 170 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 MSI1O43347 362 aaKnown RBP13.57□□□□□ -0.24
XRN1-203ENST00000463916 ATG13O75143 517 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 TYRP14679 529 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 NRLP54845 237 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 KRT31Q15323 416 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 SLC47A2Q86VL8 602 aa13.57□□□□□ -0.24
XRN1-203ENST00000463916 DENND1CQ8IV53 801 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms