RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 CDK5RAP1Q96SZ6 601 aaKnown RBP18.53■□□□□ 0.56
VPS52-214ENST00000463486 NELL2Q99435 816 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 FBRSL1Q9HCM7 1045 aaKnown RBP18.53■□□□□ 0.56
VPS52-214ENST00000463486 ST7Q9NRC1 585 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 ABCC13Q9NSE7 274 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 LTFP02788 710 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 CYP17A1P05093 508 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 KRT9P35527 623 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 TAF5Q15542 800 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 PTPN20Q4JDL3 420 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 BTBD8Q5XKL5 378 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 MSANTD2Q6P1R3 559 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 TADA2BQ86TJ2 420 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 MIB1Q86YT6 1006 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 OLIG1Q8TAK6 271 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 PPP1R13BQ96KQ4 1090 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 TTYH3Q9C0H2 523 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 NACA2Q9H009 215 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 MARCH2Q9P0N8 246 aa18.52■□□□□ 0.56
VPS52-214ENST00000463486 STK25O00506 426 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 TRDMT1O14717 391 aaKnown RBP18.51■□□□□ 0.55
VPS52-214ENST00000463486 SLC9A3R1O14745 358 aaPredicted RBP18.51■□□□□ 0.55
VPS52-214ENST00000463486 MMEP08473 750 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 IRF1P10914 325 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 CHRNB1P11230 501 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 COL9A1P20849 921 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 STAT1P42224 750 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 FMO1Q01740 532 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 UBXN2BQ14CS0 331 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 DHCR24Q15392 516 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 TAF3Q5VWG9 929 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 BEND5Q7L4P6 421 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 CPA6Q8N4T0 437 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 OTUB2Q96DC9 234 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 PCMTD1Q96MG8 357 aaPredicted RBP18.51■□□□□ 0.55
VPS52-214ENST00000463486 TBC1D14Q9P2M4 693 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 SFMBT1Q9UHJ3 866 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 RASAL2Q9UJF2 1139 aa18.51■□□□□ 0.55
VPS52-214ENST00000463486 NFATC1O95644 943 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 SERPINC1P01008 464 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 ERBB2P04626 1255 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 CYP1A1P04798 512 aaPredicted RBP18.5■□□□□ 0.55
VPS52-214ENST00000463486 OPRD1P41143 372 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 RPS9P46781 194 aaKnown RBP18.5■□□□□ 0.55
VPS52-214ENST00000463486 GABRB2P47870 512 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 NUBP1P53384 320 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 ZNF445P59923 1031 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 COG7P83436 770 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 CDR2Q01850 454 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 CCINQ13939 588 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 TRIP4Q15650 581 aaPredicted RBP18.5■□□□□ 0.55
VPS52-214ENST00000463486 FILIP1LQ4L180 1135 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 TMEM196Q5HYL7 178 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 SYPL2Q5VXT5 272 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 C1orf228Q6PIY5 440 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 IRF2BP2Q7Z5L9 587 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 ZNF677Q86XU0 584 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 TMEM25Q86YD3 366 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 FMNL3Q8IVF7 1028 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 DTWD2Q8NBA8 298 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 PRSS33Q8NF86 280 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 EZH1Q92800 747 aaPredicted RBP18.5■□□□□ 0.55
VPS52-214ENST00000463486 SPAG5Q96R06 1193 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 PCDHB18PQ96TA0 734 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 TSPY26PQ9H489 355 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 OLA1Q9NTK5 396 aaKnown RBP18.5■□□□□ 0.55
VPS52-214ENST00000463486 NDRG2Q9UN36 371 aaKnown RBP18.5■□□□□ 0.55
VPS52-214ENST00000463486 MRPS17Q9Y2R5 130 aaKnown RBP18.5■□□□□ 0.55
VPS52-214ENST00000463486 SH3BP1Q9Y3L3 701 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 CACNA1IQ9P0X4 2223 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 MYOFQ9NZM1 2061 aa18.5■□□□□ 0.55
VPS52-214ENST00000463486 SART1O43290 800 aaKnown RBP18.49■□□□□ 0.55
VPS52-214ENST00000463486 IGLV3-27P01718 113 aa18.49■□□□□ 0.55
VPS52-214ENST00000463486 GALK1P51570 392 aa18.49■□□□□ 0.55
VPS52-214ENST00000463486 NOMO3P69849 1222 aa18.49■□□□□ 0.55
VPS52-214ENST00000463486 EIF4EBP2Q13542 120 aaPredicted RBP18.49■□□□□ 0.55
VPS52-214ENST00000463486 GAS6Q14393 721 aa18.49■□□□□ 0.55
VPS52-214ENST00000463486 PON2Q15165 354 aa18.49■□□□□ 0.55
VPS52-214ENST00000463486 LY6G5CQ5SRR4 150 aa18.49■□□□□ 0.55
VPS52-214ENST00000463486 FSTL4Q6MZW2 842 aa18.49■□□□□ 0.55
VPS52-214ENST00000463486 OLFML1Q6UWY5 402 aa18.49■□□□□ 0.55
VPS52-214ENST00000463486 RSRC2Q7L4I2 434 aaKnown RBP18.49■□□□□ 0.55
VPS52-214ENST00000463486 TMEM35BQ8NCS4 154 aa18.49■□□□□ 0.55
VPS52-214ENST00000463486 SYT11Q9BT88 431 aa18.49■□□□□ 0.55
VPS52-214ENST00000463486 NAALADL1Q9UQQ1 740 aa18.49■□□□□ 0.55
VPS52-214ENST00000463486 MYO15AQ9UKN7 3530 aa18.49■□□□□ 0.55
VPS52-214ENST00000463486 SLC12A8A0AV02 714 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 GOLGA6L19H0YKK7 550 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 GFRA2O00451 464 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 GALR2O43603 387 aaPredicted RBP18.48■□□□□ 0.55
VPS52-214ENST00000463486 LSM8O95777 96 aaKnown RBP18.48■□□□□ 0.55
VPS52-214ENST00000463486 UBASH3AP57075 661 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 YWHAZP63104 245 aaKnown RBP18.48■□□□□ 0.55
VPS52-214ENST00000463486 MESP2Q0VG99 397 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 TCF15Q12870 199 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 E4F1Q66K89 784 aaPredicted RBP18.48■□□□□ 0.55
VPS52-214ENST00000463486 FAM183BPQ6ZVS7 135 aa18.48■□□□□ 0.55
VPS52-214ENST00000463486 MAML2Q8IZL2 1156 aaPredicted RBP18.48■□□□□ 0.55
VPS52-214ENST00000463486 DQX1Q8TE96 717 aaKnown RBP18.48■□□□□ 0.55
VPS52-214ENST00000463486 RNF139Q8WU17 664 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms