RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 RRAGAQ7L523 313 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 CREBRFQ8IUR6 639 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 ADGRF2Q8IZF7 708 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 BEND2Q8NDZ0 799 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 CPT1BQ92523 772 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 ARSGQ96EG1 525 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 DCAF5Q96JK2 942 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 DIAPH3Q9NSV4 1193 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 ARHGEF11O15085 1522 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 GLOD5A6NK44 160 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 TBKBP1A7MCY6 615 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 BEST1O76090 585 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 PLA2G1BP04054 148 aaKnown RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 PTPN2P17706 415 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 HOXA13P31271 388 aaPredicted RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 BMPR1AP36894 532 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 RPL7AP62424 266 aaKnown RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 SF3A3Q12874 501 aaKnown RBP eCLIP3.31□□□□□ -1.886e-7■■■■■ 34
SMC4-203ENST00000462668 IQCB1Q15051 598 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 GPR68Q15743 365 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 C5orf22Q49AR2 442 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 AGBL4Q5VU57 503 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 CBLL1Q75N03 491 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 SNX32Q86XE0 403 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 CARNMT1Q8N4J0 409 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 MYLIPQ8WY64 445 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 MAP7D2Q96T17 732 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 BCAS3Q9H6U6 928 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 DBNDD1Q9H9R9 158 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 LIN7CQ9NUP9 197 aaKnown RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 ADD3Q9UEY8 706 aaKnown RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 SARDHQ9UL12 918 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 ADAM18Q9Y3Q7 739 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 SOS1Q07889 1333 aaPredicted RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 ZNF785A8K8V0 405 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 BCAT2O15382 392 aaPredicted RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 PAPSS1O43252 624 aaPredicted RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 HNRNPRO43390 633 aaKnown RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 PPP6R2O75170 966 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 RXRAP19793 462 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 RBM6P78332 1123 aaKnown RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 WASHC5Q12768 1159 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 CHAF1BQ13112 559 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 AAK1Q2M2I8 961 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 NAIF1Q69YI7 327 aaPredicted RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 Q6ZNB5 142 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 TOR1AIP2Q8NFQ8 470 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 LBHD1Q9BQE6 289 aaPredicted RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 XAB2Q9HCS7 855 aaKnown RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 PDE7BQ9NP56 450 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 PA2G4Q9UQ80 394 aaKnown RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 PNMA6EA0A0J9YXQ4 647 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 HOXA3O43365 443 aaPredicted RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 CCNDBP1O95273 360 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 CLRN1P58418 232 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 RPS3AP61247 264 aaKnown RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 KCNAB1Q14722 419 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 UBXN2BQ14CS0 331 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 CFAP58Q5T655 872 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 DEPDC1Q5TB30 811 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 ZNF574Q6ZN55 896 aaPredicted RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 SYT13Q7L8C5 426 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 FAM217AQ8IXS0 508 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 TTC39CQ8N584 583 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 WDTC1Q8N5D0 677 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 PDPRQ8NCN5 879 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 SMARCC2Q8TAQ2 1214 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 ETNPPLQ8TBG4 499 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 BPIFB1Q8TDL5 484 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 SH3RF3Q8TEJ3 882 aaPredicted RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 PGAP3Q96FM1 320 aaPredicted RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 CCDC34Q96HJ3 373 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 OSBPL9Q96SU4 736 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 STN1Q9H668 368 aaKnown RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 KRT84Q9NSB2 600 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 HAUS2Q9NVX0 235 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 MBD1Q9UIS9 605 aaPredicted RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 GPR160Q9UJ42 338 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 ADAM29Q9UKF5 820 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 ANGEL1Q9UNK9 670 aaKnown RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 SHOC2Q9UQ13 582 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 ZDHHC9Q9Y397 364 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 CCDC188H7C350 402 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 ATP6V1B1P15313 513 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 PTPN7P35236 360 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 CASRP41180 1078 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 ZNF134P52741 427 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 PSMC6P62333 389 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 TLE3Q04726 772 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 MESP2Q0VG99 397 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 GPS1Q13098 491 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 TYSND1Q2T9J0 566 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 WDR72Q3MJ13 1102 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 ERMARDQ5T6L9 678 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 FAM83HQ6ZRV2 1179 aaPredicted RBP3.3□□□□□ -1.88
SMC4-203ENST00000462668 SLFN11Q7Z7L1 901 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 CHCHD4Q8N4Q1 142 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 FITM2Q8N6M3 262 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 AVL9Q8NBF6 648 aa3.3□□□□□ -1.88
SMC4-203ENST00000462668 FAM46DQ8NEK8 389 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms