RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 NRG3P56975 720 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 GJA9P57773 515 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 MEF2AQ02078 507 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 SP2Q02086 613 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 PPP3CAQ08209 521 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 TRAF1Q13077 416 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 ITGB3BPQ13352 177 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 KIF22Q14807 665 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 STK38Q15208 465 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 PTPAQ15257 358 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 CALCRLQ16602 461 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 DGKDQ16760 1214 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 LY6KQ17RY6 165 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 CEP55Q53EZ4 464 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 DNAJC21Q5F1R6 531 aaKnown RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 IL31Q6EBC2 164 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 TMC5Q6UXY8 1006 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 USP49Q70CQ1 688 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 ABRAQ8N0Z2 381 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 C4orf32Q8N8J7 132 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 GLB1L3Q8NCI6 653 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 DNERQ8NFT8 737 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 ETNPPLQ8TBG4 499 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 NSUN6Q8TEA1 469 aaKnown RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 SOCS4Q8WXH5 440 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 TAF4BQ92750 862 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 HAS1Q92839 578 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 HDAC10Q969S8 669 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 ERO1AQ96HE7 468 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 INPP4AQ96PE3 977 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 MXRA8Q9BRK3 442 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 FDXACB1Q9BRP7 624 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 SOX7Q9BT81 388 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 MMTAG2Q9BU76 263 aaKnown RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 OSBPL6Q9BZF3 934 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 GLT8D2Q9H1C3 349 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 ZSCAN16Q9H4T2 348 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 KCND1Q9NSA2 647 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 NOL7Q9UMY1 257 aaKnown RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 L1RE1Q9UN81 338 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 UBIAD1Q9Y5Z9 338 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 CFAP20Q9Y6A4 193 aaKnown RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 MYH11P35749 1972 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 A0A087WWV3 80 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 VWA3AA6NCI4 1184 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 MYADML2A6NDP7 307 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 FAM171A2A8MVW0 826 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 BOLA2-SMG1P6H3BVE0 249 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 STRNO43815 780 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 CYP3A4P08684 503 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 HOXC6P09630 235 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 OR52Z1P0C646 297 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 CYBAP13498 195 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 UBA1P22314 1058 aaKnown RBP5.41□□□□□ -1.54
SF3A3-202ENST00000460925 RRM1P23921 792 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 TXKP42681 527 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 NEK3P51956 506 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 GP2P55259 537 aaKnown RBP5.41□□□□□ -1.54
SF3A3-202ENST00000460925 ITGA1P56199 1179 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 ATP2C1P98194 919 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-202ENST00000460925 DSC2Q02487 901 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 WASHC5Q12768 1159 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 ADAM9Q13443 819 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 STXBP2Q15833 593 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 C3orf36Q3SXR2 165 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 RILPL1Q5EBL4 403 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 TMEM200BQ69YZ2 307 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 NCAPH2Q6IBW4 605 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 TAPT1Q6NXT6 567 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 KCNV1Q6PIU1 500 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 MAMDC4Q6UXC1 1216 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 TRMT1LQ7Z2T5 733 aaKnown RBP5.41□□□□□ -1.54
SF3A3-202ENST00000460925 ZSWIM9Q86XI8 627 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 DRC7Q8IY82 874 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 BCL6BQ8N143 479 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-202ENST00000460925 LINC00301Q8NCQ3 95 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 RAET1EQ8TD07 263 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 NEK9Q8TD19 979 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 LRRC15Q8TF66 581 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 MBOAT7Q96N66 472 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 PLIN2Q99541 437 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 ELAC2Q9BQ52 826 aaKnown RBP5.41□□□□□ -1.54
SF3A3-202ENST00000460925 ADI1Q9BV57 179 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 UNC45AQ9H3U1 944 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 GOLPH3LQ9H4A5 285 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 AGO4Q9HCK5 861 aaKnown RBP5.41□□□□□ -1.54
SF3A3-202ENST00000460925 KCNMB3Q9NPA1 279 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 CASS4Q9NQ75 786 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 RBM12Q9NTZ6 932 aaKnown RBP5.41□□□□□ -1.54
SF3A3-202ENST00000460925 KLHL11Q9NVR0 708 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 ADD3Q9UEY8 706 aaKnown RBP5.41□□□□□ -1.54
SF3A3-202ENST00000460925 ZFP69BQ9UJL9 534 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 FBXO2Q9UK22 296 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-202ENST00000460925 FBXO10Q9UK96 956 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 PCDHA5Q9Y5H7 936 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 KAT6AQ92794 2004 aa5.41□□□□□ -1.54
SF3A3-202ENST00000460925 LOXHD1Q8IVV2 1947 aa5.4□□□□□ -1.54
SF3A3-202ENST00000460925 CYP3A7-CYP3A51PA0A087WV96 503 aa5.4□□□□□ -1.54
SF3A3-202ENST00000460925 A0A1W2PR48 441 aa5.4□□□□□ -1.54
SF3A3-202ENST00000460925 TMEM150BA6NC51 233 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms