RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 DCAF17Q5H9S7 520 aaPredicted RBP14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 MDH1BQ5I0G3 518 aa14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 SCARA5Q6ZMJ2 495 aa14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 SH3RF2Q8TEC5 729 aa14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 ADAMTS14Q8WXS8 1223 aa14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 TATDN2Q93075 761 aa14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 SLC22A12Q96S37 553 aa14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 ARID3AQ99856 593 aa14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 IMPG2Q9BZV3 1241 aa14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 ZNF518BQ9C0D4 1074 aa14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 SNX25Q9H3E2 840 aa14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 CSNK1G1Q9HCP0 422 aa14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 POLMQ9NP87 494 aaPredicted RBP14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 DNAAF2Q9NVR5 837 aaKnown RBP14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 MBD1Q9UIS9 605 aaPredicted RBP14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 SLC6A14Q9UN76 642 aa14.44□□□□□ -0.1
SCAMP4-206ENST00000460767 ANKRD11Q6UB99 2663 aaPredicted RBP14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 CEP192Q8TEP8 1941 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 FAM92AA1XBS5 289 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 TULP1O00294 542 aaPredicted RBP14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 OPHN1O60890 802 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 BDNFP23560 247 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 KIR2DL1P43626 348 aaPredicted RBP14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 KCNH2Q12809 1159 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 DDR2Q16832 855 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 C2orf27AQ580R0 203 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 EOGTQ5NDL2 527 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 DPY19L2P1Q6NXN4 242 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 SPATA2LQ8IUW3 424 aaPredicted RBP14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 IL17RCQ8NAC3 791 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 ZMIZ2Q8NF64 920 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 TNIP3Q96KP6 325 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 ELOVL4Q9GZR5 314 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 THAP9Q9H5L6 903 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 MMRN2Q9H8L6 949 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 SCUBE2Q9NQ36 999 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 TMEM63CQ9P1W3 806 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 MAGEC2Q9UBF1 373 aaPredicted RBP14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 DKK4Q9UBT3 224 aa14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 MAGED2Q9UNF1 606 aaPredicted RBP14.43□□□□□ -0.1
SCAMP4-206ENST00000460767 DMXL2Q8TDJ6 3036 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 AP5Z1O43299 807 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 FGFR1OPO95684 399 aaKnown RBP14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 OLFM2O95897 454 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 CYP17A1P05093 508 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 CD59P13987 128 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 ACO1P21399 889 aaKnown RBP14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 USP46P62068 366 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 GFPT1Q06210 699 aaPredicted RBP14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 CUL2Q13617 745 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 CCDC40Q4G0X9 1142 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 SDHAF4Q5VUM1 108 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 TCERG1LQ5VWI1 586 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 SMYD5Q6GMV2 418 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 ACOT1Q86TX2 421 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 FAM35AQ86V20 835 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 TMEFF1Q8IYR6 380 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 CHCHD4Q8N4Q1 142 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 TTC39CQ8N584 583 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 C12orf29Q8N999 325 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 SLC4A11Q8NBS3 891 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 STKLD1Q8NE28 680 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 KCNV2Q8TDN2 545 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 HNRNPABQ99729 332 aaKnown RBP14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 TRPC7Q9HCX4 862 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 CISHQ9NSE2 258 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 CNTN6Q9UQ52 1028 aa14.42□□□□□ -0.1
SCAMP4-206ENST00000460767 CACNA1EQ15878 2313 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 GTPBP10A4D1E9 387 aaKnown RBP14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 F8VP50 259 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 SGK1O00141 431 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 CLDN5O00501 218 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 TRIM66O15016 1216 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 MAP3K13O43283 966 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 GJB3O75712 270 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 AFPP02771 609 aaKnown RBP14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 ITPKAP23677 461 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 ZNF132P52740 706 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 ATXN3P54252 364 aaPredicted RBP14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 RAD23BP54727 409 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 SEC13P55735 322 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 FAM193AP78312 1265 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 GCNT1Q02742 428 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 SCAPQ12770 1279 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 MIIPQ5JXC2 388 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 CCDC183Q5T5S1 534 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 SLC36A4Q6YBV0 504 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 MINDY1Q8N5J2 469 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 CCDC33Q8N5R6 958 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 ALLCQ8N6M5 410 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 ARL14EPQ8N8R7 260 aaPredicted RBP14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 TXNDC5Q8NBS9 432 aaKnown RBP14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 ENOX1Q8TC92 643 aaKnown RBP14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 RLN3Q8WXF3 142 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 CYP2S1Q96SQ9 504 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 NT5C1AQ9BXI3 368 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 LINC00597Q9H2U6 94 aa14.41□□□□□ -0.1
SCAMP4-206ENST00000460767 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.41□□□□□ -0.12e-7■■■■■ 67.3
SCAMP4-206ENST00000460767 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms