RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 NUBP1P53384 320 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 C10orf120Q5SQS8 335 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 OR6B2Q6IFH4 312 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 RSRC2Q7L4I2 434 aaKnown RBP23.52■■□□□ 1.36
C9orf3-209ENST00000460573 KIAA1958Q8N8K9 716 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 RNF139Q8WU17 664 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 KXD1Q9BQD3 176 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 ABHD10Q9NUJ1 306 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 STRIP2Q9ULQ0 834 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 ADCY5O95622 1261 aa23.51■■□□□ 1.35
C9orf3-209ENST00000460573 GZMAP12544 262 aa23.51■■□□□ 1.35
C9orf3-209ENST00000460573 VIPR2P41587 438 aa23.51■■□□□ 1.35
C9orf3-209ENST00000460573 YWHAZP63104 245 aaKnown RBP23.51■■□□□ 1.35
C9orf3-209ENST00000460573 SLC6A3Q01959 620 aa23.51■■□□□ 1.35
C9orf3-209ENST00000460573 PHF13Q86YI8 300 aaPredicted RBP23.51■■□□□ 1.35
C9orf3-209ENST00000460573 BPIFB1Q8TDL5 484 aa23.51■■□□□ 1.35
C9orf3-209ENST00000460573 FAM149B1Q96BN6 582 aa23.51■■□□□ 1.35
C9orf3-209ENST00000460573 POPDC2Q9HBU9 364 aa23.51■■□□□ 1.35
C9orf3-209ENST00000460573 THG1LQ9NWX6 298 aaKnown RBP23.51■■□□□ 1.35
C9orf3-209ENST00000460573 WDR35Q9P2L0 1181 aa23.51■■□□□ 1.35
C9orf3-209ENST00000460573 TJP2Q9UDY2 1190 aa23.51■■□□□ 1.35
C9orf3-209ENST00000460573 CA14Q9ULX7 337 aa23.51■■□□□ 1.35
C9orf3-209ENST00000460573 CPQQ9Y646 472 aa23.51■■□□□ 1.35
C9orf3-209ENST00000460573 CALB1P05937 261 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 SRFP11831 508 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 CLCN5P51795 746 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 ADKP55263 362 aaKnown RBP23.5■■□□□ 1.35
C9orf3-209ENST00000460573 GOLGA8FQ08AF8 430 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 GOLGA8DPQ0D2H9 430 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 ACAD10Q6JQN1 1059 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 OLFML1Q6UWY5 402 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 VITQ6UXI7 678 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 FAM183BPQ6ZVS7 135 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 SLC26A9Q7LBE3 791 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.5■■□□□ 1.35
C9orf3-209ENST00000460573 YAF2Q8IY57 180 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 ST13P5Q8NFI4 369 aaPredicted RBP23.5■■□□□ 1.35
C9orf3-209ENST00000460573 OLIG1Q8TAK6 271 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 PLA2G2FQ9BZM2 168 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 SMG9Q9H0W8 520 aaKnown RBP23.5■■□□□ 1.35
C9orf3-209ENST00000460573 CCL26Q9Y258 94 aa23.5■■□□□ 1.35
C9orf3-209ENST00000460573 GOLGA6L3A6NEY3 463 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 CAPN9O14815 690 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 GALR2O43603 387 aaPredicted RBP23.49■■□□□ 1.35
C9orf3-209ENST00000460573 HSF2BPO75031 334 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 TBX18O95935 607 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 COG7P83436 770 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 C1QBPQ07021 282 aaKnown RBP23.49■■□□□ 1.35
C9orf3-209ENST00000460573 FCHO2Q0JRZ9 810 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 TCF15Q12870 199 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 USP4Q13107 963 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 ZNF77Q15935 545 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 MSANTD2Q6P1R3 559 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 XYLT1Q86Y38 959 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 TMEM105Q8N8V8 129 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 SLC30A5Q8TAD4 765 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 SH3RF2Q8TEC5 729 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 VCPIP1Q96JH7 1222 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 RPP25Q9BUL9 199 aaKnown RBP23.49■■□□□ 1.35
C9orf3-209ENST00000460573 TRMT61BQ9BVS5 477 aaKnown RBP23.49■■□□□ 1.35
C9orf3-209ENST00000460573 ADAM22Q9P0K1 906 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 WNT16Q9UBV4 365 aa23.49■■□□□ 1.35
C9orf3-209ENST00000460573 H0Y858 1186 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 LEFTY2O00292 366 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 NCAM1P13591 858 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 GSCP56915 257 aaPredicted RBP23.48■■□□□ 1.35
C9orf3-209ENST00000460573 CDK17Q00537 523 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 EFEMP1Q12805 493 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 ARHGAP29Q52LW3 1261 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 WDR59Q6PJI9 974 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 MMS22LQ6ZRQ5 1243 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 EDEM1Q92611 657 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 RSPRY1Q96DX4 576 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 ZFRQ96KR1 1074 aaKnown RBP23.48■■□□□ 1.35
C9orf3-209ENST00000460573 C11orf70Q9BRQ4 267 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 KLF16Q9BXK1 252 aaPredicted RBP23.48■■□□□ 1.35
C9orf3-209ENST00000460573 FAM86C1Q9NVL1 165 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 MARCH2Q9P0N8 246 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 ARHGAP20Q9P2F6 1191 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 IMPACTQ9P2X3 320 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 NUDT5Q9UKK9 219 aa23.48■■□□□ 1.35
C9orf3-209ENST00000460573 SSU72P8A0A1W2PR75 194 aa23.47■■□□□ 1.35
C9orf3-209ENST00000460573 DDX3XO00571 662 aaKnown RBP eCLIP23.47■■□□□ 1.353e-11■■■□□ 16.8
C9orf3-209ENST00000460573 CHADO15335 359 aa23.47■■□□□ 1.35
C9orf3-209ENST00000460573 KPNA1P52294 538 aaPredicted RBP23.47■■□□□ 1.35
C9orf3-209ENST00000460573 CC2D1AQ6P1N0 951 aaPredicted RBP23.47■■□□□ 1.35
C9orf3-209ENST00000460573 MON1BQ7L1V2 547 aa23.47■■□□□ 1.35
C9orf3-209ENST00000460573 IRF7Q92985 503 aa23.47■■□□□ 1.35
C9orf3-209ENST00000460573 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.47■■□□□ 1.354e-6■■■■□ 23.2
C9orf3-209ENST00000460573 SMPD4Q9NXE4 827 aa23.47■■□□□ 1.35
C9orf3-209ENST00000460573 ADAMTS1Q9UHI8 967 aa23.47■■□□□ 1.35
C9orf3-209ENST00000460573 RASAL2Q9UJF2 1139 aa23.47■■□□□ 1.35
C9orf3-209ENST00000460573 E2F8A0AVK6 867 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 RTN2O75298 545 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 FYNP06241 537 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 ZXDBP98169 803 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 PTP4A2Q12974 167 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 MAPK8IP2Q13387 824 aaPredicted RBP23.46■■□□□ 1.35
C9orf3-209ENST00000460573 MTF1Q14872 753 aa23.46■■□□□ 1.35
C9orf3-209ENST00000460573 FAM102AQ5T9C2 384 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms