RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 YAF2Q8IY57 180 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 MSANTD4Q8NCY6 345 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 ZNF397Q8NF99 534 aaPredicted RBP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 DQX1Q8TE96 717 aaKnown RBP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 SYN2Q92777 582 aaPredicted RBP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 GOLGA1Q92805 767 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 CDK5RAP1Q96SZ6 601 aaKnown RBP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 TRMT61BQ9BVS5 477 aaKnown RBP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 KLF16Q9BXK1 252 aaPredicted RBP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 SLC2A4RGQ9NR83 387 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 METTL5Q9NRN9 209 aaKnown RBP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 ABCC13Q9NSE7 274 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 OLA1Q9NTK5 396 aaKnown RBP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 MARCH2Q9P0N8 246 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 ARHGAP20Q9P2F6 1191 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 DNMT3LQ9UJW3 386 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 ATMINO43313 823 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-206ENST00000459895 GREM1O60565 184 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 HSF2BPO75031 334 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 STC2O76061 302 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 GJB6O95452 261 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 SERPING1P05155 500 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 HMBSP08397 361 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 NCAM1P13591 858 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 ARSAP15289 507 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 HNRNPH3P31942 346 aaKnown RBP13.41□□□□□ -0.26
COL18A1-206ENST00000459895 ADKP55263 362 aaKnown RBP13.41□□□□□ -0.26
COL18A1-206ENST00000459895 TNK2Q07912 1038 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 ARHGAP29Q52LW3 1261 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 TRNP1Q6NT89 227 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 WDR59Q6PJI9 974 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 ERICH1Q86X53 443 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 PHF13Q86YI8 300 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-206ENST00000459895 UBALD2Q8IYN6 164 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 ZNF276Q8N554 614 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 ADAM32Q8TC27 787 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 RNF139Q8WU17 664 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 DNASE1L2Q92874 299 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 C18orf8Q96DM3 657 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 SLC2A13Q96QE2 648 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 BRD9Q9H8M2 597 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 POPDC2Q9HBU9 364 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 HPS4Q9NQG7 708 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 GKN1Q9NS71 199 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 ASNSD1Q9NWL6 643 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 SFMBT1Q9UHJ3 866 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 CA14Q9ULX7 337 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 NAALADL1Q9UQQ1 740 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 TECTAO75443 2155 aa13.41□□□□□ -0.26
COL18A1-206ENST00000459895 SLC12A8A0AV02 714 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 TMCO5BA8MYB1 307 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 ZNF263O14978 683 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 CHADO15335 359 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 IGLV3-25P01717 112 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 TPM1P09493 284 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 FLT3P36888 993 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 SCNN1AP37088 669 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 IFNAR2P48551 515 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 GSCP56915 257 aaPredicted RBP13.4□□□□□ -0.26
COL18A1-206ENST00000459895 SLC6A3Q01959 620 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 EML3Q32P44 896 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 SYPL2Q5VXT5 272 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 PHLDB2Q86SQ0 1253 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 ZDHHC17Q8IUH5 632 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 CNGA4Q8IV77 575 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 BBS7Q8IWZ6 715 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 OSCP1Q8WVF1 389 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 TRIM62Q9BVG3 475 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 ADAM33Q9BZ11 813 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 FAM204AQ9H8W3 233 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 ARHGEF3Q9NR81 526 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 STRIP2Q9ULQ0 834 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 NENFQ9UMX5 172 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 SH3BP1Q9Y3L3 701 aa13.4□□□□□ -0.26
COL18A1-206ENST00000459895 NCOR1O75376 2440 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 KRBA1A5PL33 1030 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 FAM86C2PA6NEL3 165 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 OTOL1A6NHN0 477 aaPredicted RBP13.39□□□□□ -0.27
COL18A1-206ENST00000459895 IRAK2O43187 625 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 ADCY5O95622 1261 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 IGLV3-27P01718 113 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 GLI1P08151 1106 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 TFE3P19532 575 aaPredicted RBP13.39□□□□□ -0.27
COL18A1-206ENST00000459895 TNFAIP3P21580 790 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 CDC25BP30305 580 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 CORO1AP31146 461 aaKnown RBP13.39□□□□□ -0.27
COL18A1-206ENST00000459895 SOX9P48436 509 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 VCPP55072 806 aaKnown RBP13.39□□□□□ -0.27
COL18A1-206ENST00000459895 YWHAZP63104 245 aaKnown RBP13.39□□□□□ -0.27
COL18A1-206ENST00000459895 C1QBPQ07021 282 aaKnown RBP13.39□□□□□ -0.27
COL18A1-206ENST00000459895 SIGLEC14Q08ET2 396 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 CC2D1AQ6P1N0 951 aaPredicted RBP13.39□□□□□ -0.27
COL18A1-206ENST00000459895 Q6ZNB5 142 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 BEND5Q7L4P6 421 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 DEFB106AQ8N104 65 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 EMC1Q8N766 993 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 TC2NQ8N9U0 490 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 C3orf20Q8ND61 904 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 TTC8Q8TAM2 541 aa13.39□□□□□ -0.27
COL18A1-206ENST00000459895 EDAQ92838 391 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms