RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 BPIFA3Q9BQP9 254 aa21.73■■□□□ 1.07
VARS-218ENST00000459667 HSD3B7Q9H2F3 369 aa21.73■■□□□ 1.07
VARS-218ENST00000459667 FBRSL1Q9HCM7 1045 aaKnown RBP21.73■■□□□ 1.07
VARS-218ENST00000459667 ABCC13Q9NSE7 274 aa21.73■■□□□ 1.07
VARS-218ENST00000459667 MARCH2Q9P0N8 246 aa21.73■■□□□ 1.07
VARS-218ENST00000459667 FBXO4Q9UKT5 387 aa21.73■■□□□ 1.07
VARS-218ENST00000459667 SYCE3A1L190 88 aa21.72■■□□□ 1.07
VARS-218ENST00000459667 STC2O76061 302 aa21.72■■□□□ 1.07
VARS-218ENST00000459667 EGFP01133 1207 aa21.72■■□□□ 1.07
VARS-218ENST00000459667 OPRD1P41143 372 aa21.72■■□□□ 1.07
VARS-218ENST00000459667 ACADSBP45954 432 aa21.72■■□□□ 1.07
VARS-218ENST00000459667 RPL34P49207 117 aaKnown RBP21.72■■□□□ 1.07
VARS-218ENST00000459667 GAS6Q14393 721 aa21.72■■□□□ 1.07
VARS-218ENST00000459667 FAM71AQ8IYT1 594 aa21.72■■□□□ 1.07
VARS-218ENST00000459667 CLEC4CQ8WTT0 213 aa21.72■■□□□ 1.07
VARS-218ENST00000459667 STK32AQ8WU08 396 aa21.72■■□□□ 1.07
VARS-218ENST00000459667 PHOX2BQ99453 314 aa21.72■■□□□ 1.07
VARS-218ENST00000459667 NAA15Q9BXJ9 866 aaKnown RBP21.72■■□□□ 1.07
VARS-218ENST00000459667 MIS12Q9H081 205 aa21.72■■□□□ 1.07
VARS-218ENST00000459667 PLCB1Q9NQ66 1216 aa21.72■■□□□ 1.07
VARS-218ENST00000459667 PRMT8Q9NR22 394 aaPredicted RBP21.72■■□□□ 1.07
VARS-218ENST00000459667 MYOFQ9NZM1 2061 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 SLC12A8A0AV02 714 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 SMTNL1A8MU46 457 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 HMBSP08397 361 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 SP9P0CG40 484 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 CLCN1P35523 988 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 KLK7P49862 253 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 CCR3P51677 355 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 CSTF1Q05048 431 aaKnown RBP21.71■■□□□ 1.07
VARS-218ENST00000459667 GAD2Q05329 585 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 SLC47A2Q86VL8 602 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 SPEM1Q8N4L4 309 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 GOLGA1Q92805 767 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 SLC4A5Q9BY07 1137 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 GANQ9H2C0 597 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 SPHK2Q9NRA0 654 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 CYTH4Q9UIA0 394 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 PCDHGC3Q9UN70 934 aa21.71■■□□□ 1.07
VARS-218ENST00000459667 LGALS16A8MUM7 142 aa21.7■■□□□ 1.06
VARS-218ENST00000459667 LTFP02788 710 aa21.7■■□□□ 1.06
VARS-218ENST00000459667 BPIFB4P59827 614 aa21.7■■□□□ 1.06
VARS-218ENST00000459667 PDCLQ13371 301 aa21.7■■□□□ 1.06
VARS-218ENST00000459667 MAMSTRQ6ZN01 415 aa21.7■■□□□ 1.06
VARS-218ENST00000459667 Q6ZNB5 142 aa21.7■■□□□ 1.06
VARS-218ENST00000459667 PASD1Q8IV76 773 aa21.7■■□□□ 1.06
VARS-218ENST00000459667 FUCA2Q9BTY2 467 aa21.7■■□□□ 1.06
VARS-218ENST00000459667 STK33Q9BYT3 514 aa21.7■■□□□ 1.06
VARS-218ENST00000459667 FAM207AQ9NSI2 230 aaPredicted RBP21.7■■□□□ 1.06
VARS-218ENST00000459667 LRRC10BA6NIK2 292 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 E5RJQ4 531 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 F8VZ95 297 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 HOXC11O43248 304 aaPredicted RBP21.69■■□□□ 1.06
VARS-218ENST00000459667 SART1O43290 800 aaKnown RBP21.69■■□□□ 1.06
VARS-218ENST00000459667 RNF40O75150 1001 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 ATP1A3P13637 1013 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 CORO1AP31146 461 aaKnown RBP21.69■■□□□ 1.06
VARS-218ENST00000459667 KRT9P35527 623 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 EIF2DP41214 584 aaKnown RBP21.69■■□□□ 1.06
VARS-218ENST00000459667 NBL1P41271 181 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 CXCL12P48061 93 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 ZNF165P49910 485 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 PPP2R5DQ14738 602 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 ANO4Q32M45 955 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 ZNF528Q3MIS6 628 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 FBXO43Q4G163 708 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 C12orf40Q86WS4 652 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 TMEM25Q86YD3 366 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 FMNL3Q8IVF7 1028 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 DHX40Q8IX18 779 aaKnown RBP21.69■■□□□ 1.06
VARS-218ENST00000459667 SCUBE3Q8IX30 993 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 PLD4Q96BZ4 506 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 DCLK3Q9C098 648 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 SFMBT1Q9UHJ3 866 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 ZNF510Q9Y2H8 683 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 SIK3Q9Y2K2 1263 aa21.69■■□□□ 1.06
VARS-218ENST00000459667 KLKB1P03952 638 aa21.68■■□□□ 1.06
VARS-218ENST00000459667 SLC6A11P48066 632 aa21.68■■□□□ 1.06
VARS-218ENST00000459667 SATB1Q01826 763 aa21.68■■□□□ 1.06
VARS-218ENST00000459667 UBXN1Q04323 297 aa21.68■■□□□ 1.06
VARS-218ENST00000459667 SYCP1Q15431 976 aa21.68■■□□□ 1.06
VARS-218ENST00000459667 MSANTD2Q6P1R3 559 aa21.68■■□□□ 1.06
VARS-218ENST00000459667 TSSK4Q6SA08 328 aa21.68■■□□□ 1.06
VARS-218ENST00000459667 APTXQ7Z2E3 356 aaKnown RBP21.68■■□□□ 1.06
VARS-218ENST00000459667 TMEM110Q86TL2 294 aa21.68■■□□□ 1.06
VARS-218ENST00000459667 C1orf131Q8NDD1 294 aaKnown RBP21.68■■□□□ 1.06
VARS-218ENST00000459667 EZH1Q92800 747 aaPredicted RBP21.68■■□□□ 1.06
VARS-218ENST00000459667 FAM149B1Q96BN6 582 aa21.68■■□□□ 1.06
VARS-218ENST00000459667 PCMTD1Q96MG8 357 aaPredicted RBP21.68■■□□□ 1.06
VARS-218ENST00000459667 LHX5Q9H2C1 402 aa21.68■■□□□ 1.06
VARS-218ENST00000459667 HBS1LQ9Y450 684 aaKnown RBP21.68■■□□□ 1.06
VARS-218ENST00000459667 KIAA1549LQ6ZVL6 1849 aa21.68■■□□□ 1.06
VARS-218ENST00000459667 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.67■■□□□ 1.06
VARS-218ENST00000459667 PAPSS1O43252 624 aaPredicted RBP21.67■■□□□ 1.06
VARS-218ENST00000459667 CAVIN2O95810 425 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 CYP11B1P15538 503 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 POLR2FP61218 127 aaKnown RBP21.67■■□□□ 1.06
VARS-218ENST00000459667 KDSRQ06136 332 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 ZSCAN23Q3MJ62 389 aa21.67■■□□□ 1.06
VARS-218ENST00000459667 PKN3Q6P5Z2 889 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms