RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 CHORDC1Q9UHD1 332 aaPredicted RBP6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZMYM5Q9UJ78 669 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 SALL4Q9UJQ4 1053 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 DNMT3LQ9UJW3 386 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 TMEM59LQ9UK28 342 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 LSM7Q9UK45 103 aaKnown RBP6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 TTC7AQ9ULT0 858 aaPredicted RBP6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 AP4E1Q9UPM8 1137 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZNF148Q9UQR1 794 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 KIAA1671Q9BY89 1806 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 CLUHO75153 1309 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 GOLGA6CA6NDK9 693 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 GOLGA6BA6NDN3 693 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 FAM187AA6NFU0 413 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 SLC38A8A6NNN8 435 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 SGK1O00141 431 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 EEF2KO00418 725 aaKnown RBP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZNF197O14709 1029 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 MCF2LO15068 1137 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 MDM4O15151 490 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZNF185O15231 689 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 MTSS1O43312 755 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 HCRTO43612 131 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 CREB3O43889 395 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 BEST1O76090 585 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 ABLIM3O94929 683 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 ECEL1O95672 775 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 C1RP00736 705 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 RHOXF2BP0C7M4 288 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 GOLGA6DP0CG33 693 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 PTPN2P17706 415 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 RPL17P18621 184 aaKnown RBP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 TGM2P21980 687 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 KDELR1P24390 212 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 CDC25CP30307 473 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 STIP1P31948 543 aaKnown RBP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 HTR7P34969 479 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 NR2C2P49116 596 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 RPL34P49207 117 aaKnown RBP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 TBX4P57082 545 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 TPI1P60174 286 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZNF211Q13398 564 aaPredicted RBP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 GPM6BQ13491 265 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 CCNG2Q16589 344 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 CCDC14Q49A88 953 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 PPP1R15BQ5SWA1 713 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 KIAA0319Q5VV43 1072 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 PLPP4Q5VZY2 271 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 PPP2R2DQ66LE6 453 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 NUGGCQ68CJ6 796 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 CCDC137Q6PK04 289 aaKnown RBP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 TMCO3Q6UWJ1 677 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 SPOCD1Q6ZMY3 1216 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 MTERF4Q7Z6M4 381 aaKnown RBP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 ADAT2Q7Z6V5 191 aaKnown RBP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 TMCO2Q7Z6W1 182 aaPredicted RBP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 PCGF5Q86SE9 256 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 DDX42Q86XP3 938 aaKnown RBP eCLIP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZNF354CQ86Y25 554 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 SLC13A5Q86YT5 568 aaPredicted RBP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 CREG2Q8IUH2 290 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 TCEAL8Q8IYN2 117 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 TMEM130Q8N3G9 435 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 RASGEF1CQ8N431 466 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 MMGT1Q8N4V1 131 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 ATL2Q8NHH9 583 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 JOSD2Q8TAC2 188 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 GIPC2Q8TF65 315 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 COG1Q8WTW3 980 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 POF1BQ8WVV4 589 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 EDEM1Q92611 657 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 TMEM209Q96SK2 561 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 RUFY1Q96T51 708 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 KRT12Q99456 494 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 CLSTN3Q9BQT9 956 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 RHOXF2Q9BQY4 288 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 HEMGNQ9BXL5 484 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 AP1M1Q9BXS5 423 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 DCLK3Q9C098 648 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 LMAN2LQ9H0V9 348 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 GOLPH3Q9H4A6 298 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 FAM114A2Q9NRY5 505 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 GOLGA6AQ9NYA3 693 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 MARCH2Q9P0N8 246 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 RCOR3Q9P2K3 495 aaPredicted RBP6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 TJP2Q9UDY2 1190 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 CYTH4Q9UIA0 394 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 NAALADL1Q9UQQ1 740 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 TLR6Q9Y2C9 796 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 GREB1Q4ZG55 1949 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 PLXNA4Q9HCM2 1894 aa6.07□□□□□ -1.44
RNU1-88P-201ENST00000459274 SRCAPQ6ZRS2 3230 aa6.06□□□□□ -1.44
RNU1-88P-201ENST00000459274 WDR27A2RRH5 827 aa6.06□□□□□ -1.44
RNU1-88P-201ENST00000459274 TARSL2A2RTX5 802 aaKnown RBP6.06□□□□□ -1.44
RNU1-88P-201ENST00000459274 LINC01553A4QN01 128 aa6.06□□□□□ -1.44
RNU1-88P-201ENST00000459274 CFAP69A5D8W1 941 aa6.06□□□□□ -1.44
RNU1-88P-201ENST00000459274 YJEFN3A6XGL0 299 aa6.06□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZNF487B1APH4 448 aa6.06□□□□□ -1.44
RNU1-88P-201ENST00000459274 E7ENQ6 273 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms