RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 PTPN5P54829 565 aa8.82□□□□□ -1
VPS50-208ENST00000458707 POLE2P56282 527 aa8.82□□□□□ -1
VPS50-208ENST00000458707 CNTN2Q02246 1040 aa8.82□□□□□ -1
VPS50-208ENST00000458707 WASHC5Q12768 1159 aa8.82□□□□□ -1
VPS50-208ENST00000458707 FOXD4Q12950 439 aaPredicted RBP8.82□□□□□ -1
VPS50-208ENST00000458707 CDC16Q13042 620 aa8.82□□□□□ -1
VPS50-208ENST00000458707 ACAP1Q15027 740 aa8.82□□□□□ -1
VPS50-208ENST00000458707 NOMO1Q15155 1222 aa8.82□□□□□ -1
VPS50-208ENST00000458707 SMTNL2Q2TAL5 461 aa8.82□□□□□ -1
VPS50-208ENST00000458707 PTPN20Q4JDL3 420 aa8.82□□□□□ -1
VPS50-208ENST00000458707 XKR3Q5GH77 459 aa8.82□□□□□ -1
VPS50-208ENST00000458707 CYP4A22Q5TCH4 519 aa8.82□□□□□ -1
VPS50-208ENST00000458707 SCARA3Q6AZY7 606 aa8.82□□□□□ -1
VPS50-208ENST00000458707 IZUMO2Q6UXV1 221 aa8.82□□□□□ -1
VPS50-208ENST00000458707 ACAD11Q709F0 780 aa8.82□□□□□ -1
VPS50-208ENST00000458707 PRPF39Q86UA1 669 aaKnown RBP8.82□□□□□ -1
VPS50-208ENST00000458707 FAM83AQ86UY5 434 aa8.82□□□□□ -1
VPS50-208ENST00000458707 BRSK2Q8IWQ3 736 aa8.82□□□□□ -1
VPS50-208ENST00000458707 DNAJC5GQ8N7S2 189 aa8.82□□□□□ -1
VPS50-208ENST00000458707 FAM71DQ8N9W8 422 aa8.82□□□□□ -1
VPS50-208ENST00000458707 JOSD2Q8TAC2 188 aa8.82□□□□□ -1
VPS50-208ENST00000458707 TFAP2BQ92481 460 aa8.82□□□□□ -1
VPS50-208ENST00000458707 ZNF341Q9BYN7 854 aa8.82□□□□□ -1
VPS50-208ENST00000458707 NIF3L1Q9GZT8 377 aa8.82□□□□□ -1
VPS50-208ENST00000458707 PORCNQ9H237 461 aa8.82□□□□□ -1
VPS50-208ENST00000458707 TMEM134Q9H6X4 195 aa8.82□□□□□ -1
VPS50-208ENST00000458707 ZWILCHQ9H900 591 aa8.82□□□□□ -1
VPS50-208ENST00000458707 RSAD1Q9HA92 442 aa8.82□□□□□ -1
VPS50-208ENST00000458707 HOMER2Q9NSB8 354 aa8.82□□□□□ -1
VPS50-208ENST00000458707 RYDENQ9NUL5 291 aaKnown RBP8.82□□□□□ -1
VPS50-208ENST00000458707 DNAAF2Q9NVR5 837 aaKnown RBP8.82□□□□□ -1
VPS50-208ENST00000458707 PPARGC1AQ9UBK2 798 aaKnown RBP8.82□□□□□ -1
VPS50-208ENST00000458707 SDR42E2A6NKP2 422 aa8.81□□□□□ -1
VPS50-208ENST00000458707 K7ERI5 159 aa8.81□□□□□ -1
VPS50-208ENST00000458707 FAM189A1O60320 539 aa8.81□□□□□ -1
VPS50-208ENST00000458707 ITGBL1O95965 494 aaPredicted RBP8.81□□□□□ -1
VPS50-208ENST00000458707 EDN1P05305 212 aa8.81□□□□□ -1
VPS50-208ENST00000458707 UBTFL6P0CB48 400 aaPredicted RBP8.81□□□□□ -1
VPS50-208ENST00000458707 YWHAGP61981 247 aaKnown RBP eCLIP8.81□□□□□ -1
VPS50-208ENST00000458707 YWHAZP63104 245 aaKnown RBP8.81□□□□□ -1
VPS50-208ENST00000458707 TMPRSS15P98073 1019 aa8.81□□□□□ -1
VPS50-208ENST00000458707 CUL3Q13618 768 aa8.81□□□□□ -1
VPS50-208ENST00000458707 LRRC23Q53EV4 343 aaPredicted RBP8.81□□□□□ -1
VPS50-208ENST00000458707 KCNT1Q5JUK3 1230 aa8.81□□□□□ -1
VPS50-208ENST00000458707 GJC2Q5T442 439 aaPredicted RBP8.81□□□□□ -1
VPS50-208ENST00000458707 LGSNQ5TDP6 509 aa8.81□□□□□ -1
VPS50-208ENST00000458707 ARID3BQ8IVW6 561 aaPredicted RBP8.81□□□□□ -1
VPS50-208ENST00000458707 SMYD1Q8NB12 490 aa8.81□□□□□ -1
VPS50-208ENST00000458707 SPATA18Q8TC71 538 aa8.81□□□□□ -1
VPS50-208ENST00000458707 SLC35B4Q969S0 331 aa8.81□□□□□ -1
VPS50-208ENST00000458707 RTP4Q96DX8 246 aa8.81□□□□□ -1
VPS50-208ENST00000458707 MTBPQ96DY7 904 aa8.81□□□□□ -1
VPS50-208ENST00000458707 DHRS1Q96LJ7 313 aa8.81□□□□□ -1
VPS50-208ENST00000458707 TUBGCP5Q96RT8 1024 aa8.81□□□□□ -1
VPS50-208ENST00000458707 HAPLN3Q96S86 360 aa8.81□□□□□ -1
VPS50-208ENST00000458707 GMLQ99445 158 aa8.81□□□□□ -1
VPS50-208ENST00000458707 LBHD1Q9BQE6 289 aaPredicted RBP8.81□□□□□ -1
VPS50-208ENST00000458707 TARS2Q9BW92 718 aaKnown RBP8.81□□□□□ -1
VPS50-208ENST00000458707 SPATA16Q9BXB7 569 aa8.81□□□□□ -1
VPS50-208ENST00000458707 IRF2BPLQ9H1B7 796 aa8.81□□□□□ -1
VPS50-208ENST00000458707 STN1Q9H668 368 aaKnown RBP8.81□□□□□ -1
VPS50-208ENST00000458707 DHX33Q9H6R0 707 aaKnown RBP8.81□□□□□ -1
VPS50-208ENST00000458707 PLAC1Q9HBJ0 212 aa8.81□□□□□ -1
VPS50-208ENST00000458707 POPDC2Q9HBU9 364 aa8.81□□□□□ -1
VPS50-208ENST00000458707 JPH1Q9HDC5 661 aaPredicted RBP8.81□□□□□ -1
VPS50-208ENST00000458707 ZNF510Q9Y2H8 683 aa8.81□□□□□ -1
VPS50-208ENST00000458707 HBS1LQ9Y450 684 aaKnown RBP8.81□□□□□ -1
VPS50-208ENST00000458707 ZSWIM8A7E2V4 1837 aa8.81□□□□□ -1
VPS50-208ENST00000458707 PTPRFP10586 1907 aa8.81□□□□□ -1
VPS50-208ENST00000458707 A0A088AWK7 358 aa8.81□□□□□ -1
VPS50-208ENST00000458707 TRUB2O95900 331 aaKnown RBP8.81□□□□□ -1
VPS50-208ENST00000458707 BPGMP07738 259 aa8.81□□□□□ -1
VPS50-208ENST00000458707 NR3C2P08235 984 aa8.81□□□□□ -1
VPS50-208ENST00000458707 GSTT1P30711 240 aa8.81□□□□□ -1
VPS50-208ENST00000458707 CRHR1P34998 444 aa8.81□□□□□ -1
VPS50-208ENST00000458707 AQP5P55064 265 aa8.81□□□□□ -1
VPS50-208ENST00000458707 MYL6P60660 151 aa8.81□□□□□ -1
VPS50-208ENST00000458707 ACTR2P61160 394 aa8.81□□□□□ -1
VPS50-208ENST00000458707 RPL26P61254 145 aaKnown RBP8.81□□□□□ -1
VPS50-208ENST00000458707 YWHAEP62258 255 aaKnown RBP8.81□□□□□ -1
VPS50-208ENST00000458707 XIAPP98170 497 aa8.81□□□□□ -1
VPS50-208ENST00000458707 ROR1Q01973 937 aa8.81□□□□□ -1
VPS50-208ENST00000458707 USP4Q13107 963 aa8.81□□□□□ -1
VPS50-208ENST00000458707 MPP3Q13368 585 aa8.81□□□□□ -1
VPS50-208ENST00000458707 MTM1Q13496 603 aa8.81□□□□□ -1
VPS50-208ENST00000458707 CHI3L2Q15782 390 aa8.81□□□□□ -1
VPS50-208ENST00000458707 CNPY1Q3B7I2 92 aa8.81□□□□□ -1
VPS50-208ENST00000458707 MTERF2Q49AM1 385 aa8.81□□□□□ -1
VPS50-208ENST00000458707 LIN52Q52LA3 116 aa8.81□□□□□ -1
VPS50-208ENST00000458707 STXBP5Q5T5C0 1151 aa8.81□□□□□ -1
VPS50-208ENST00000458707 DENND1BQ6P3S1 775 aa8.81□□□□□ -1
VPS50-208ENST00000458707 ARCQ7LC44 396 aa8.81□□□□□ -1
VPS50-208ENST00000458707 PDSS2Q86YH6 399 aa8.81□□□□□ -1
VPS50-208ENST00000458707 RFX6Q8HWS3 928 aa8.81□□□□□ -1
VPS50-208ENST00000458707 CRLF3Q8IUI8 442 aa8.81□□□□□ -1
VPS50-208ENST00000458707 SLC4A11Q8NBS3 891 aa8.81□□□□□ -1
VPS50-208ENST00000458707 KCTD6Q8NC69 237 aa8.81□□□□□ -1
VPS50-208ENST00000458707 DEPTORQ8TB45 409 aa8.81□□□□□ -1
VPS50-208ENST00000458707 FAM172AQ8WUF8 416 aa8.81□□□□□ -1
VPS50-208ENST00000458707 LRRC39Q96DD0 335 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms