RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CDK5RAP1Q96SZ6 601 aaKnown RBP22.7■■□□□ 1.22
CPNE1-220ENST00000458038 ZDHHC4Q9NPG8 344 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 HMGXB4Q9UGU5 601 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 WASF3Q9UPY6 502 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 ZNF510Q9Y2H8 683 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 IGF2RP11717 2491 aa22.69■■□□□ 1.22
CPNE1-220ENST00000458038 TBX18O95935 607 aa22.69■■□□□ 1.22
CPNE1-220ENST00000458038 SERPINF2P08697 491 aa22.69■■□□□ 1.22
CPNE1-220ENST00000458038 ACO1P21399 889 aaKnown RBP22.69■■□□□ 1.22
CPNE1-220ENST00000458038 ITPKAP23677 461 aa22.69■■□□□ 1.22
CPNE1-220ENST00000458038 ADORA2BP29275 332 aa22.69■■□□□ 1.22
CPNE1-220ENST00000458038 PGFP49763 221 aa22.69■■□□□ 1.22
CPNE1-220ENST00000458038 ATXN3P54252 364 aaPredicted RBP22.69■■□□□ 1.22
CPNE1-220ENST00000458038 DNM1Q05193 864 aaKnown RBP22.69■■□□□ 1.22
CPNE1-220ENST00000458038 GFPT1Q06210 699 aaPredicted RBP22.69■■□□□ 1.22
CPNE1-220ENST00000458038 UNQ6494/PRO21346Q6UXR6 183 aa22.69■■□□□ 1.22
CPNE1-220ENST00000458038 INTS8Q75QN2 995 aaKnown RBP22.69■■□□□ 1.22
CPNE1-220ENST00000458038 CHPFQ8IZ52 775 aa22.69■■□□□ 1.22
CPNE1-220ENST00000458038 CCDC150Q8NCX0 1101 aa22.69■■□□□ 1.22
CPNE1-220ENST00000458038 ELMO3Q96BJ8 720 aa22.69■■□□□ 1.22
CPNE1-220ENST00000458038 GABRG3Q99928 467 aa22.69■■□□□ 1.22
CPNE1-220ENST00000458038 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.69■■□□□ 1.22
CPNE1-220ENST00000458038 CALCOCO1Q9P1Z2 691 aa22.69■■□□□ 1.22
CPNE1-220ENST00000458038 A0A1W2PQF6 199 aa22.68■■□□□ 1.22
CPNE1-220ENST00000458038 TMEM8BA6NDV4 472 aa22.68■■□□□ 1.22
CPNE1-220ENST00000458038 HHLA1C9JL84 531 aa22.68■■□□□ 1.22
CPNE1-220ENST00000458038 ZZEF1O43149 2961 aa22.68■■□□□ 1.22
CPNE1-220ENST00000458038 FOXC1Q12948 553 aa22.68■■□□□ 1.22
CPNE1-220ENST00000458038 ORC1Q13415 861 aa22.68■■□□□ 1.22
CPNE1-220ENST00000458038 E2F5Q15329 346 aa22.68■■□□□ 1.22
CPNE1-220ENST00000458038 C1orf220Q5T0J3 134 aa22.68■■□□□ 1.22
CPNE1-220ENST00000458038 SPOPLQ6IQ16 392 aa22.68■■□□□ 1.22
CPNE1-220ENST00000458038 TTC39CQ8N584 583 aa22.68■■□□□ 1.22
CPNE1-220ENST00000458038 IPO4Q8TEX9 1081 aaKnown RBP22.68■■□□□ 1.22
CPNE1-220ENST00000458038 FAXDC2Q96IV6 333 aa22.68■■□□□ 1.22
CPNE1-220ENST00000458038 HCN2Q9UL51 889 aa22.68■■□□□ 1.22
CPNE1-220ENST00000458038 NPC1O15118 1278 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 CYP26A1O43174 497 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 CFIP05156 583 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 RALAP11233 206 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 RARGP13631 454 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 KRT13P13646 458 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 RPL13P26373 211 aaKnown RBP22.67■■□□□ 1.22
CPNE1-220ENST00000458038 DGKGP49619 791 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 KIF11P52732 1056 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 ZNF132P52740 706 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 ZNF33AQ06730 810 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 C10orf120Q5SQS8 335 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 EGFLAMQ63HQ2 1017 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 TPGS1Q6ZTW0 290 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 CCDC186Q7Z3E2 898 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 MIB1Q86YT6 1006 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 HDDC3Q8N4P3 179 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 KDF1Q8NAX2 398 aaPredicted RBP22.67■■□□□ 1.22
CPNE1-220ENST00000458038 DEFB124Q8NES8 71 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 OSER1Q9NX31 292 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 CLIC5Q9NZA1 410 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 FBXO10Q9UK96 956 aa22.67■■□□□ 1.22
CPNE1-220ENST00000458038 IGHV1OR15-9A0A0B4J2B8 117 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 A0A1W2PQD8 194 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 A0A1W2PQH9 124 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 TRIM24O15164 1050 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 RHOBTB3O94955 611 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 SYPP08247 313 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 PFKFB1P16118 471 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 RDXP35241 583 aaKnown RBP22.66■■□□□ 1.22
CPNE1-220ENST00000458038 CHKAP35790 457 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 MAPK8P45983 427 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 COG7P83436 770 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 SEMA3BQ13214 749 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 Q6ZNB5 142 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 GPRIN1Q7Z2K8 1008 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 PIP4P1Q86T03 277 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 ADAM33Q9BZ11 813 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 DCLK3Q9C098 648 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 NIF3L1Q9GZT8 377 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 FAM124BQ9H5Z6 455 aaPredicted RBP22.66■■□□□ 1.22
CPNE1-220ENST00000458038 CAPN10Q9HC96 672 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 CD248Q9HCU0 757 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 NAGPAQ9UK23 515 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 ADAMTS9Q9P2N4 1935 aa22.66■■□□□ 1.22
CPNE1-220ENST00000458038 ZFHX4Q86UP3 3567 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 A0A1B0GVL5 298 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 PRRT4C9JH25 899 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 CILPO75339 1184 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 CISD3P0C7P0 127 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 NR2F2P24468 414 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 GTF2H1P32780 548 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 PSMC2P35998 433 aaKnown RBP22.65■■□□□ 1.22
CPNE1-220ENST00000458038 WASP42768 502 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 HNRNPDQ14103 355 aaKnown RBP22.65■■□□□ 1.22
CPNE1-220ENST00000458038 SYCP2LQ5T4T6 812 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 FOXJ1Q92949 421 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 DUSP16Q9BY84 665 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 HPSEQ9Y251 543 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 SLC27A6Q9Y2P4 619 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 USP3Q9Y6I4 520 aa22.65■■□□□ 1.22
CPNE1-220ENST00000458038 OPHN1O60890 802 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 NDUFS2O75306 463 aa22.64■■□□□ 1.21
CPNE1-220ENST00000458038 STC2O76061 302 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms