RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ARHGAP18Q8N392 663 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 BPIFB1Q8TDL5 484 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 DEPDC1BQ8WUY9 529 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 CPA5Q8WXQ8 436 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 SYN2Q92777 582 aaPredicted RBP10.54□□□□□ -0.72
ATG4A-206ENST00000457035 EDAQ92838 391 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 PBXIP1Q96AQ6 731 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 ZFRQ96KR1 1074 aaKnown RBP10.54□□□□□ -0.72
ATG4A-206ENST00000457035 KCNK17Q96T54 332 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 AGPAT1Q99943 283 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 TRMT61BQ9BVS5 477 aaKnown RBP10.54□□□□□ -0.72
ATG4A-206ENST00000457035 KLF16Q9BXK1 252 aaPredicted RBP10.54□□□□□ -0.72
ATG4A-206ENST00000457035 TRIM5Q9C035 493 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 MIS12Q9H081 205 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 PDCL3Q9H2J4 239 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 KIF9Q9HAQ2 790 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 SLC2A4RGQ9NR83 387 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 GKN1Q9NS71 199 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 DUSP12Q9UNI6 340 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 LUC7L2Q9Y383 392 aaKnown RBP10.54□□□□□ -0.72
ATG4A-206ENST00000457035 CEP83Q9Y592 693 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.54□□□□□ -0.72
ATG4A-206ENST00000457035 CPQQ9Y646 472 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 TMEM221A6NGB7 291 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 M0R296 226 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 LEFTY2O00292 366 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 ARNTLO00327 626 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 CHADO15335 359 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 LTFP02788 710 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 ERBB2P04626 1255 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 MBL2P11226 248 aaPredicted RBP10.53□□□□□ -0.72
ATG4A-206ENST00000457035 SRFP11831 508 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 CASP14P31944 242 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 TAF5Q15542 800 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 ZNF77Q15935 545 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 C10orf120Q5SQS8 335 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 BTBD8Q5XKL5 378 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 HGSNATQ68CP4 663 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 TRIM67Q6ZTA4 783 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 BEND5Q7L4P6 421 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 ZNF571Q7Z3V5 609 aaPredicted RBP10.53□□□□□ -0.72
ATG4A-206ENST00000457035 ZNF397Q8NF99 534 aaPredicted RBP10.53□□□□□ -0.72
ATG4A-206ENST00000457035 SH3RF2Q8TEC5 729 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 WBP2Q969T9 261 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 RNF166Q96A37 237 aaPredicted RBP10.53□□□□□ -0.72
ATG4A-206ENST00000457035 C18orf8Q96DM3 657 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 PIWIL1Q96J94 861 aaKnown RBP10.53□□□□□ -0.72
ATG4A-206ENST00000457035 NOX5Q96PH1 765 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 FAM83CQ9BQN1 747 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 ADAM33Q9BZ11 813 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 NUCKS1Q9H1E3 243 aaKnown RBP10.53□□□□□ -0.72
ATG4A-206ENST00000457035 KCNH6Q9H252 994 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 HAUS4Q9H6D7 363 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 ABCC13Q9NSE7 274 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 DNMT3LQ9UJW3 386 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 CACNA1IQ9P0X4 2223 aa10.53□□□□□ -0.72
ATG4A-206ENST00000457035 MDM4O15151 490 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 GREM1O60565 184 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 SKILP12757 684 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 TNFAIP3P21580 790 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 MMP8P22894 467 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 GDI1P31150 447 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 HNRNPH3P31942 346 aaKnown RBP10.52□□□□□ -0.73
ATG4A-206ENST00000457035 ZNF75DP51815 510 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 SNX16P57768 344 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 YWHAZP63104 245 aaKnown RBP10.52□□□□□ -0.73
ATG4A-206ENST00000457035 SLC6A3Q01959 620 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 PTP4A2Q12974 167 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 USP4Q13107 963 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 TBX2Q13207 712 aaPredicted RBP10.52□□□□□ -0.73
ATG4A-206ENST00000457035 ARID5BQ14865 1188 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 ASIC2Q16515 512 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 CLEC16AQ2KHT3 1053 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 ARHGAP29Q52LW3 1261 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 NAA35Q5VZE5 725 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 TRIM72Q6ZMU5 477 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 FAM183BPQ6ZVS7 135 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 TADA2BQ86TJ2 420 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 ERICH1Q86X53 443 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 SUGP1Q8IWZ8 645 aaKnown RBP10.52□□□□□ -0.73
ATG4A-206ENST00000457035 KIAA1958Q8N8K9 716 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 SLC30A5Q8TAD4 765 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 EDEM1Q92611 657 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 IRF7Q92985 503 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 ASIC4Q96FT7 647 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 ZFYVE19Q96K21 471 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 CDK5RAP1Q96SZ6 601 aaKnown RBP10.52□□□□□ -0.73
ATG4A-206ENST00000457035 LINC00597Q9H2U6 94 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 TRPV5Q9NQA5 729 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 THG1LQ9NWX6 298 aaKnown RBP10.52□□□□□ -0.73
ATG4A-206ENST00000457035 SMPD4Q9NXE4 827 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 WNT16Q9UBV4 365 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 NAALADL1Q9UQQ1 740 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 MIA3Q5JRA6 1907 aa10.52□□□□□ -0.73
ATG4A-206ENST00000457035 COL4A2P08572 1712 aa10.51□□□□□ -0.73
ATG4A-206ENST00000457035 E2F8A0AVK6 867 aa10.51□□□□□ -0.73
ATG4A-206ENST00000457035 FAM170AA1A519 330 aa10.51□□□□□ -0.73
ATG4A-206ENST00000457035 ZNF263O14978 683 aa10.51□□□□□ -0.73
ATG4A-206ENST00000457035 SART1O43290 800 aaKnown RBP10.51□□□□□ -0.73
ATG4A-206ENST00000457035 GLI1P08151 1106 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms