RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 FAM163BP0C2L3 166 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 HLA-EP13747 358 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 GAP43P17677 238 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 PTPN1P18031 435 aaKnown RBP13.94□□□□□ -0.18
SNHG17-208ENST00000456953 ZNF132P52740 706 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 PTPRNQ16849 979 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 DUOXA2Q1HG44 320 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 FUT11Q495W5 492 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 HTR3DQ70Z44 454 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 SYCP3Q8IZU3 236 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 ENGASEQ8NFI3 743 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 OR5B17Q8NGF7 314 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 C1orf216Q8TAB5 229 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 NOC3LQ8WTT2 800 aaKnown RBP13.94□□□□□ -0.18
SNHG17-208ENST00000456953 CBWD1Q9BRT8 395 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 NACA2Q9H009 215 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 PRORYQ9H606 182 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 CHORDC1Q9UHD1 332 aaPredicted RBP13.94□□□□□ -0.18
SNHG17-208ENST00000456953 PCDHB13Q9Y5F0 798 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 SPTA1P02549 2419 aa13.94□□□□□ -0.18
SNHG17-208ENST00000456953 WASH3PC4AMC7 463 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 NPC1O15118 1278 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 IGLV3-19P01714 112 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 ZDHHC11BP0C7U3 371 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 IRF1P10914 325 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 LONP1P36776 959 aaKnown RBP13.93□□□□□ -0.18
SNHG17-208ENST00000456953 GRK6P43250 576 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 DGKGP49619 791 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 TPMTP51580 245 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 AFF3P51826 1226 aaKnown RBP13.93□□□□□ -0.18
SNHG17-208ENST00000456953 DYMQ7RTS9 669 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 OR6B3Q8NGW1 331 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 SCAMP5Q8TAC9 235 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 WBP2Q969T9 261 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 NXPE2Q96DL1 559 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 MRPL45Q9BRJ2 306 aaKnown RBP13.93□□□□□ -0.18
SNHG17-208ENST00000456953 B3GNT5Q9BYG0 378 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 MKRN2Q9H000 416 aaKnown RBP13.93□□□□□ -0.18
SNHG17-208ENST00000456953 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.93□□□□□ -0.188e-9■■■■■ 29.8
SNHG17-208ENST00000456953 IL37Q9NZH6 218 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 EIF2B4Q9UI10 523 aaKnown RBP13.93□□□□□ -0.18
SNHG17-208ENST00000456953 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.93□□□□□ -0.18
SNHG17-208ENST00000456953 NME7Q9Y5B8 376 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 ATP6V1DQ9Y5K8 247 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 RAI2Q9Y5P3 530 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 STON1Q9Y6Q2 735 aa13.93□□□□□ -0.18
SNHG17-208ENST00000456953 A0A1B0GVT2 93 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 KCNJ18B7U540 433 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 CLDN5O00501 218 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 KIAA0391O15091 583 aaKnown RBP13.92□□□□□ -0.18
SNHG17-208ENST00000456953 GREM1O60565 184 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 GCNT3O95395 438 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 CISD3P0C7P0 127 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 ITPKBP27987 946 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 ALCAMQ13740 583 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 SURF1Q15526 300 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 LRRC69Q6ZNQ3 347 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 TPGS1Q6ZTW0 290 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 TMPRSS12Q86WS5 348 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 GPD1LQ8N335 351 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 ZNF843Q8N446 348 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 B3GALNT2Q8NCR0 500 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 SIPA1Q96FS4 1042 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 NUP58Q9BVL2 599 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 PCED1AQ9H1Q7 454 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 DPEP3Q9H4B8 488 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 PCIF1Q9H4Z3 704 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 OLFML3Q9NRN5 406 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 COMMD8Q9NX08 183 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 TBC1D7Q9P0N9 293 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 GMIPQ9P107 970 aa13.92□□□□□ -0.18
SNHG17-208ENST00000456953 ATP8B3O60423 1300 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 FAM92AA1XBS5 289 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 ZNF233A6NK53 670 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 CAPN9O14815 690 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 PCDHGA12O60330 932 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 SYNCRIPO60506 623 aaKnown RBP13.91□□□□□ -0.18
SNHG17-208ENST00000456953 TLR5O60602 858 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 PRPF6O94906 941 aaKnown RBP13.91□□□□□ -0.18
SNHG17-208ENST00000456953 BMP15O95972 392 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 EIF2S3P41091 472 aaKnown RBP13.91□□□□□ -0.18
SNHG17-208ENST00000456953 CSNK1EP49674 416 aaKnown RBP13.91□□□□□ -0.18
SNHG17-208ENST00000456953 CASP5P51878 434 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 SLC5A3P53794 718 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 GOLGA8FQ08AF8 430 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 GOLGA8DPQ0D2H9 430 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 ENPP2Q13822 863 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 KIF19Q2TAC6 998 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 FOXD4L6Q3SYB3 417 aaPredicted RBP13.91□□□□□ -0.18
SNHG17-208ENST00000456953 CCDC157Q569K6 752 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 DHRS13Q6UX07 377 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 FOXD4L3Q6VB84 417 aaPredicted RBP13.91□□□□□ -0.18
SNHG17-208ENST00000456953 TMPRSS6Q8IU80 811 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 WDR49Q8IV35 697 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 KCNK16Q96T55 309 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 TRIM9Q9C026 710 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 DMAP1Q9NPF5 467 aaPredicted RBP13.91□□□□□ -0.18
SNHG17-208ENST00000456953 LSM7Q9UK45 103 aaKnown RBP13.91□□□□□ -0.18
SNHG17-208ENST00000456953 ZDHHC9Q9Y397 364 aa13.91□□□□□ -0.18
SNHG17-208ENST00000456953 CAPN8A6NHC0 703 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms