RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 RPL22P35268 128 aaKnown RBP4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 RGS2P41220 211 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 CRADDP78560 199 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 AMPD3Q01432 767 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 SLC18A2Q05940 514 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 GPS1Q13098 491 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 ZBTB41Q5SVQ8 909 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 TSHZ1Q6ZSZ6 1077 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 SV2AQ7L0J3 742 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 DEFB107AQ8IZN7 70 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 PLD6Q8N2A8 252 aaKnown RBP4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 FIBCD1Q8N539 461 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 OGFOD1Q8N543 542 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 SLC15A4Q8N697 577 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 NEDD1Q8NHV4 660 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 C12orf43Q96C57 262 aaKnown RBP4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 MAELQ96JY0 434 aaKnown RBP4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 TRAIPQ9BWF2 469 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 NACA2Q9H009 215 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 INTS2Q9H0H0 1204 aaKnown RBP4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 VCXQ9H320 206 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 RUBCNLQ9H714 662 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 COPS7BQ9H9Q2 264 aaPredicted RBP4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 TRNAU1APQ9NX07 287 aaKnown RBP4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 MTMR4Q9NYA4 1195 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 NKIRAS1Q9NYS0 192 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 LAMB1P07942 1786 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 PRSS51A0A1B0GVH4 220 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 SMIM31A0A1B0GVY4 71 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 PIK3CDO00329 1044 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 SIN3BO75182 1162 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 RSL1D1O76021 490 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 GCNT3O95395 438 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 ITGB6P18564 788 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CALRP27797 417 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 GBP1P32455 592 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 ELK3P41970 407 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CACNB3P54284 484 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CALCOCO2Q13137 446 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 DOC2BQ14184 412 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 KRT72Q14CN4 511 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 PHKG1Q16816 387 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 PPP1R3AQ16821 1122 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC44A4Q53GD3 710 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 PITRM1Q5JRX3 1037 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 FAM91A1Q658Y4 838 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 B3GNT9Q6UX72 402 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 B3GNT6Q6ZMB0 384 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CAND1Q86VP6 1230 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 MYO1HQ8N1T3 1032 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 ZSCAN18Q8TBC5 510 aaPredicted RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 AGR3Q8TD06 166 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 NDE1Q9NXR1 346 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 MAGED1Q9Y5V3 778 aaPredicted RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CHD5Q8TDI0 1954 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 E7ESA3 106 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 XPO1O14980 1071 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 LIASO43766 372 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 ADCY3O60266 1144 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 SNNO75324 88 aaPredicted RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 KCNA4P22459 653 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CHN2P52757 468 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 GEN1Q17RS7 908 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 HMBOX1Q6NT76 420 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 KLC3Q6P597 504 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 KRT27Q7Z3Y8 459 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF554Q86TJ5 538 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 OSTM1Q86WC4 334 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC38A6Q8IZM9 456 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 LRRC43Q8N309 656 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 TMEM151AQ8N4L1 468 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 PTCD2Q8WV60 388 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 NUDT8Q8WV74 236 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 IRGQQ8WZA9 623 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 MCUR1Q96AQ8 359 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF653Q96CK0 615 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 GRAMD1AQ96CP6 724 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CALML4Q96GE6 196 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 LRCH3Q96II8 777 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 RUNDC3BQ96NL0 473 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 BTBD2Q9BX70 525 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 APOBEC3GQ9HC16 384 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 TRPC7Q9HCX4 862 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 TBC1D22BQ9NU19 505 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNHIT2Q9UHR6 403 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CYTH4Q9UIA0 394 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 SLCO3A1Q9UIG8 710 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CDH22Q9UJ99 828 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 RPL26L1Q9UNX3 145 aaKnown RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 TEX264Q9Y6I9 313 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 CNTNAP2Q9UHC6 1331 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 H0Y858 1186 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 DNALI1O14645 258 aaPredicted RBP4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 AQP9O43315 295 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 MAP3K7O43318 606 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 LTFP02788 710 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 AOC1P19801 751 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 ARSEP51690 589 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 PSMC5P62195 406 aa4.71□□□□□ -1.66
DEPDC1-202ENST00000456315 BFSP1Q12934 665 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms