RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.12□□□□□ -1.75
RBM39-220ENST00000455343 TBC1D22BQ9NU19 505 aa4.12□□□□□ -1.75
RBM39-220ENST00000455343 PPP4R1LQ9P1A2 415 aa4.12□□□□□ -1.75
RBM39-220ENST00000455343 GABBR1Q9UBS5 961 aa4.12□□□□□ -1.75
RBM39-220ENST00000455343 PCDHB2Q9Y5E7 798 aa4.12□□□□□ -1.75
RBM39-220ENST00000455343 PCDHA10Q9Y5I2 948 aa4.12□□□□□ -1.75
RBM39-220ENST00000455343 MYH7BA7E2Y1 1941 aa4.12□□□□□ -1.75
RBM39-220ENST00000455343 SETXQ7Z333 2677 aaKnown RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 FANCMQ8IYD8 2048 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 NBEAQ8NFP9 2946 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 A0A087WZ62 844 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 hCG_1642624A0A1W2PR95 340 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 E7EWF7 191 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 F8W810 466 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 DDX39AO00148 427 aaKnown RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 EDIL3O43854 480 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 ECI2O75521 394 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 CYP7B1O75881 506 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 PAPSS2O95340 614 aaPredicted RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 GJB6O95452 261 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 POMCP01189 267 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 CYP1A1P04798 512 aaPredicted RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 HNRNPA1P09651 372 aaKnown RBP eCLIP4.11□□□□□ -1.75
RBM39-220ENST00000455343 SPATA31D3P0C874 917 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 MYBP10242 640 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 NCLP19338 710 aaKnown RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 SFPQP23246 707 aaKnown RBP eCLIP4.11□□□□□ -1.75
RBM39-220ENST00000455343 HOXA6P31267 233 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 HOXA11P31270 313 aaPredicted RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 CIITAP33076 1130 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 GRIA2P42262 883 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 LIFRP42702 1097 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 MLLT6P55198 1093 aaPredicted RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 PPP2R2AP63151 447 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 NTHL1P78549 312 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 RNASELQ05823 741 aaKnown RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 LPAL2Q16609 132 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 LONRF3Q496Y0 759 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 LRSAM1Q6UWE0 723 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 B3GNT9Q6UX72 402 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 UNQ6494/PRO21346Q6UXR6 183 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 SPATA31D4Q6ZUB0 917 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 TPRG1Q6ZUI0 275 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 TMTC3Q6ZXV5 915 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 TRMT1LQ7Z2T5 733 aaKnown RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 GRASPQ7Z6J2 395 aaPredicted RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 ZNF410Q86VK4 478 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 PLA2G4DQ86XP0 818 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 PALB2Q86YC2 1186 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 SMC5Q8IY18 1101 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 CKAP2LQ8IYA6 745 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 GSTCDQ8NEC7 633 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 DVL3Q92997 716 aaPredicted RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 LENG9Q96B70 501 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 PGBD4Q96DM1 585 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 FDXACB1Q9BRP7 624 aaPredicted RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 PHF20Q9BVI0 1012 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 LSM14BQ9BX40 385 aaKnown RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 PLA2G2FQ9BZM2 168 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 TMEM168Q9H0V1 697 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 CDIP1Q9H305 208 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 SMOC1Q9H4F8 434 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 RSAD1Q9HA92 442 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 IFT122Q9HBG6 1241 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 TRPV5Q9NQA5 729 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 HEBP1Q9NRV9 189 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 RXFP3Q9NSD7 469 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 DIAPH3Q9NSV4 1193 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 NRBP2Q9NSY0 501 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 AGPAT5Q9NUQ2 364 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 MIOSQ9NXC5 875 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 HSPBP1Q9NZL4 362 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 ASH2LQ9UBL3 628 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 ST6GALNAC2Q9UJ37 374 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 FBXW11Q9UKB1 542 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 CROTQ9UKG9 612 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 PIN4Q9Y237 131 aaKnown RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 MRPS17Q9Y2R5 130 aaKnown RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 PRG3Q9Y2Y8 225 aaPredicted RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 LAMA1P25391 3075 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 CNTNAP2Q9UHC6 1331 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 DSPP15924 2871 aaKnown RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 ASH1LQ9NR48 2969 aaKnown RBP4.11□□□□□ -1.75
RBM39-220ENST00000455343 BPTFQ12830 3046 aa4.11□□□□□ -1.75
RBM39-220ENST00000455343 FLNBO75369 2602 aaKnown RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 A0A1W2PQU0 124 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 TMEM8BA6NDV4 472 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 SMCO2A6NFE2 343 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 ARL5CA6NH57 179 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 SRRM3A6NNA2 597 aaPredicted RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 K7ESF4 209 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 AGRPO00253 132 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 TAF4O00268 1085 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 MAN2B1O00754 1011 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 SH2B2O14492 632 aaPredicted RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 MAFKO60675 156 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 MAFO75444 373 aaPredicted RBP4.1□□□□□ -1.75
RBM39-220ENST00000455343 KCNK5O95279 499 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 ZNF806P0C7X5 589 aa4.1□□□□□ -1.75
RBM39-220ENST00000455343 CALM1P0DP23 149 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms