RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 TUBP50607 506 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 C19orf57Q0VDD7 668 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 ALCAMQ13740 583 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 SURF1Q15526 300 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 SCARA5Q6ZMJ2 495 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 FAM124AQ86V42 546 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 WDR49Q8IV35 697 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 GALNT15Q8N3T1 639 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 RDH13Q8NBN7 331 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 BAHD1Q8TBE0 780 aaPredicted RBP10.47□□□□□ -0.73
CLCN4-204ENST00000454850 DNASE2BQ8WZ79 361 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 KIF2CQ99661 725 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 CDC6Q99741 560 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 MKRN2Q9H000 416 aaKnown RBP10.47□□□□□ -0.73
CLCN4-204ENST00000454850 SMYD3Q9H7B4 428 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 DMAP1Q9NPF5 467 aaPredicted RBP10.47□□□□□ -0.73
CLCN4-204ENST00000454850 KRT82Q9NSB4 513 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 PANK4Q9NVE7 773 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 HSPBP1Q9NZL4 362 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 KIAA1522Q9P206 1035 aaPredicted RBP10.47□□□□□ -0.73
CLCN4-204ENST00000454850 WDR35Q9P2L0 1181 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 DKK4Q9UBT3 224 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 CCDC39Q9UFE4 941 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 LSM7Q9UK45 103 aaKnown RBP10.47□□□□□ -0.73
CLCN4-204ENST00000454850 MYO18BQ8IUG5 2567 aa10.47□□□□□ -0.73
CLCN4-204ENST00000454850 GFRA2O00451 464 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 KIAA0391O15091 583 aaKnown RBP10.46□□□□□ -0.73
CLCN4-204ENST00000454850 AP1G2O75843 785 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 ZNF883P0CG24 379 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 CSNK1EP49674 416 aaKnown RBP10.46□□□□□ -0.73
CLCN4-204ENST00000454850 TPMTP51580 245 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 MYL6P60660 151 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 ORC1Q13415 861 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 TRPC3Q13507 836 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 SNX30Q5VWJ9 437 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 IL27RAQ6UWB1 636 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 HTR3DQ70Z44 454 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 SCUBE3Q8IX30 993 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 HPS3Q969F9 1004 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 JAKMIP2Q96AA8 810 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 ELMO3Q96BJ8 720 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 CCDC127Q96BQ5 260 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 SIPA1Q96FS4 1042 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 SMARCD1Q96GM5 515 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 UBL7Q96S82 380 aaPredicted RBP10.46□□□□□ -0.73
CLCN4-204ENST00000454850 KLF16Q9BXK1 252 aaPredicted RBP10.46□□□□□ -0.73
CLCN4-204ENST00000454850 ITM2CQ9NQX7 267 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 MARK1Q9P0L2 795 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 USP36Q9P275 1121 aaKnown RBP10.46□□□□□ -0.73
CLCN4-204ENST00000454850 SLCO1B1Q9Y6L6 691 aa10.46□□□□□ -0.73
CLCN4-204ENST00000454850 HECTD1Q9ULT8 2610 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 COL6A6A6NMZ7 2263 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 A0A087WV48 116 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 METTL12A8MUP2 240 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 MDM4O15151 490 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 SYNCRIPO60506 623 aaKnown RBP10.45□□□□□ -0.74
CLCN4-204ENST00000454850 GREM1O60565 184 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 C1QL1O75973 258 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 CISD3P0C7P0 127 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 ZDHHC11BP0C7U3 371 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 ACADMP11310 421 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 CCDC130P13994 396 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 ITPKBP27987 946 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 TXLNAP40222 546 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 STAT6P42226 847 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 IL12RB1P42701 662 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 CYP2J2P51589 502 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 CDH8P55286 799 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 IL9RQ01113 521 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 GOLGA8FQ08AF8 430 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 GOLGA8DPQ0D2H9 430 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 CAMK2BQ13554 666 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 SNRNP35Q16560 246 aaKnown RBP10.45□□□□□ -0.74
CLCN4-204ENST00000454850 DHRS13Q6UX07 377 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 LAYNQ6UX15 382 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 PAQR9Q6ZVX9 377 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 TMPRSS6Q8IU80 811 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 PDCD7Q8N8D1 485 aaKnown RBP10.45□□□□□ -0.74
CLCN4-204ENST00000454850 CADM4Q8NFZ8 388 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 SLC39A7Q92504 469 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 PRCCQ92733 491 aaPredicted RBP10.45□□□□□ -0.74
CLCN4-204ENST00000454850 CLIC6Q96NY7 704 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 CGRRF1Q99675 332 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 DUSP9Q99956 384 aaKnown RBP10.45□□□□□ -0.74
CLCN4-204ENST00000454850 PANK2Q9BZ23 570 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.45□□□□□ -0.746e-9■■■■■ 134.6
CLCN4-204ENST00000454850 TLR8Q9NR97 1041 aaKnown RBP10.45□□□□□ -0.74
CLCN4-204ENST00000454850 NUDT5Q9UKK9 219 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 NFE2L3Q9Y4A8 694 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 SNX11Q9Y5W9 270 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 CLIC4Q9Y696 253 aa10.45□□□□□ -0.74
CLCN4-204ENST00000454850 FRMD3A2A2Y4 597 aa10.44□□□□□ -0.74
CLCN4-204ENST00000454850 PLK4O00444 970 aa10.44□□□□□ -0.74
CLCN4-204ENST00000454850 KCNK3O14649 394 aa10.44□□□□□ -0.74
CLCN4-204ENST00000454850 CYP26A1O43174 497 aa10.44□□□□□ -0.74
CLCN4-204ENST00000454850 PHACTR2O75167 634 aa10.44□□□□□ -0.74
CLCN4-204ENST00000454850 BEST1O76090 585 aa10.44□□□□□ -0.74
CLCN4-204ENST00000454850 DKK1O94907 266 aa10.44□□□□□ -0.74
CLCN4-204ENST00000454850 OXTRP30559 389 aa10.44□□□□□ -0.74
CLCN4-204ENST00000454850 ATP5C1P36542 298 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms