RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ETFBKMTQ8IXQ9 262 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 CCDC33Q8N5R6 958 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 MLKLQ8NB16 471 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 RBBP8NLQ8NC74 664 aaPredicted RBP11.21□□□□□ -0.61
DDX39A-203ENST00000454233 LMO3Q8TAP4 145 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 UBA3Q8TBC4 463 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 BBS2Q9BXC9 721 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 INTS2Q9H0H0 1204 aaKnown RBP11.21□□□□□ -0.61
DDX39A-203ENST00000454233 OLA1Q9NTK5 396 aaKnown RBP11.21□□□□□ -0.61
DDX39A-203ENST00000454233 MARCH2Q9P0N8 246 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 EBF1Q9UH73 591 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 SLC12A8A0AV02 714 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 M0QYV0 167 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 TULP2O00295 520 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 GREM1O60565 184 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 ALDH1A2O94788 518 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 KLF8O95600 359 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-203ENST00000454233 HMBSP08397 361 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 TYRP14679 529 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 SDHBP21912 280 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 CHKAP35790 457 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 LMNB2Q03252 620 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 SPEM2Q0P670 501 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 ADIGQ0VDE8 80 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 MESP2Q0VG99 397 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 CNGA2Q16280 664 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 CRY1Q16526 586 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 EOGTQ5NDL2 527 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 C10orf76Q5T2E6 689 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 GRAMD4Q6IC98 578 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 Q6ZNB5 142 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 TRMT11Q7Z4G4 463 aaKnown RBP11.2□□□□□ -0.62
DDX39A-203ENST00000454233 ARHGEF19Q8IW93 802 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 FAM160A2Q8N612 972 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-203ENST00000454233 ALLCQ8N6M5 410 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 TERB1Q8NA31 727 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 RNF139Q8WU17 664 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 KCTD13Q8WZ19 329 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 TFAP2BQ92481 460 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 KAT5Q92993 513 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 CNOT6LQ96LI5 555 aaKnown RBP11.2□□□□□ -0.62
DDX39A-203ENST00000454233 CLSTN2Q9H4D0 955 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 POLMQ9NP87 494 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-203ENST00000454233 CNGB3Q9NQW8 809 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 DNAJC17Q9NVM6 304 aaKnown RBP11.2□□□□□ -0.62
DDX39A-203ENST00000454233 MARK1Q9P0L2 795 aa11.2□□□□□ -0.62
DDX39A-203ENST00000454233 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.2□□□□□ -0.62
DDX39A-203ENST00000454233 PRR5-ARHGAP8B1AHC4 643 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 RNF225M0QZC1 329 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-203ENST00000454233 CACNG3O60359 315 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 KRT5P13647 590 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 LCP1P13796 627 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 BRD2P25440 801 aaKnown RBP11.19□□□□□ -0.62
DDX39A-203ENST00000454233 CORO1AP31146 461 aaKnown RBP11.19□□□□□ -0.62
DDX39A-203ENST00000454233 KIR2DL1P43626 348 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-203ENST00000454233 MTIF2P46199 727 aaKnown RBP11.19□□□□□ -0.62
DDX39A-203ENST00000454233 ARHGAP8P85298 464 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 PUM1Q14671 1186 aaKnown RBP eCLIP11.19□□□□□ -0.62
DDX39A-203ENST00000454233 ELF2Q15723 593 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 PKDCCQ504Y2 493 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 USP39Q53GS9 565 aaKnown RBP11.19□□□□□ -0.62
DDX39A-203ENST00000454233 EMC10Q5UCC4 262 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 ANO7Q6IWH7 933 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 ENOSF1Q7L5Y1 443 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 KBTBD6Q86V97 674 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 SFTPA1Q8IWL2 248 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 SCML4Q8N228 414 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 PHTF2Q8N3S3 785 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 ZNF513Q8N8E2 541 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-203ENST00000454233 IL17RCQ8NAC3 791 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 TXNDC5Q8NBS9 432 aaKnown RBP11.19□□□□□ -0.62
DDX39A-203ENST00000454233 KCNV2Q8TDN2 545 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 GOLGA1Q92805 767 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 PLD4Q96BZ4 506 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 RMDN1Q96DB5 314 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 LOXL4Q96JB6 756 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 FAM81BQ96LP2 452 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 NUP62CLQ9H1M0 184 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 UBE2TQ9NPD8 197 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-203ENST00000454233 ABCC13Q9NSE7 274 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 DACH1Q9UI36 760 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 ZNF292O60281 2723 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 KIAA1549LQ6ZVL6 1849 aa11.19□□□□□ -0.62
DDX39A-203ENST00000454233 SPTBN4Q9H254 2564 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 ANTXRLA6NF34 631 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 SGK1O00141 431 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 FOXD2O60548 495 aaPredicted RBP11.18□□□□□ -0.62
DDX39A-203ENST00000454233 RHOBTB1O94844 696 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 CYBBP04839 570 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 GBP1P32455 592 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 HARS2P49590 506 aaKnown RBP11.18□□□□□ -0.62
DDX39A-203ENST00000454233 DGKGP49619 791 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 RGS7P49802 495 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 MFAP3P55082 362 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 DAOAP59103 153 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 CSRP2Q16527 193 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 BSPRYQ5W0U4 402 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 SDE2Q6IQ49 451 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 GBP6Q6ZN66 633 aa11.18□□□□□ -0.62
DDX39A-203ENST00000454233 BHLHA9Q7RTU4 235 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms