RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 VN1R3Q9BXE9 311 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 CARD9Q9H257 536 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 TMLHEQ9NVH6 421 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 RASAL2Q9UJF2 1139 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 ANAPC7Q9UJX3 599 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 AMFRQ9UKV5 643 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 ATP6V1G2O95670 118 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 CTNNB1P35222 781 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 GPR17Q13304 367 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 MAMLD1Q13495 774 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 C9orf50Q5SZB4 431 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 C11orf63Q6NUN7 778 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 VPS52Q8N1B4 723 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 SIX6OS1Q8N1H7 587 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 FBXO22Q8NEZ5 403 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 OR2W6PQ8NHA6 318 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 FEZF2Q8TBJ5 459 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 KCTD13Q8WZ19 329 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 RUNDC3BQ96NL0 473 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 PLVAPQ9BX97 442 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 UBE2OQ9C0C9 1292 aaKnown RBP16.54■□□□□ 0.24
SNX17-204ENST00000453453 DDX47Q9H0S4 455 aaKnown RBP16.54■□□□□ 0.24
SNX17-204ENST00000453453 EBF2Q9HAK2 575 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 ABI2Q9NYB9 513 aaPredicted RBP16.54■□□□□ 0.24
SNX17-204ENST00000453453 CHORDC1Q9UHD1 332 aaPredicted RBP16.54■□□□□ 0.24
SNX17-204ENST00000453453 COG5Q9UP83 839 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 CDY1Q9Y6F8 540 aa16.54■□□□□ 0.24
SNX17-204ENST00000453453 PATJQ8NI35 1801 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 TBC1D4O60343 1298 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 KRT3P12035 628 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 LCP1P13796 627 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 RPL34P49207 117 aaKnown RBP16.53■□□□□ 0.24
SNX17-204ENST00000453453 DNA2P51530 1060 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 SHHQ15465 462 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 C6orf118Q5T5N4 469 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 FAM102AQ5T9C2 384 aaPredicted RBP16.53■□□□□ 0.24
SNX17-204ENST00000453453 DUPD1Q68J44 220 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 VSTM1Q6UX27 236 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 GPR65Q8IYL9 337 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 GBP7Q8N8V2 638 aaPredicted RBP16.53■□□□□ 0.24
SNX17-204ENST00000453453 CCDC63Q8NA47 563 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 SPPL2BQ8TCT7 592 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 MCRS1Q96EZ8 462 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 RSRC1Q96IZ7 334 aaKnown RBP16.53■□□□□ 0.24
SNX17-204ENST00000453453 ANKRD27Q96NW4 1050 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 SMOQ99835 787 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 PABPC3Q9H361 631 aaKnown RBP16.53■□□□□ 0.24
SNX17-204ENST00000453453 CSNK1G1Q9HCP0 422 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 PNPLA8Q9NP80 782 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNX17-204ENST00000453453 MRPL17Q9NRX2 175 aaKnown RBP16.53■□□□□ 0.24
SNX17-204ENST00000453453 BCCIPQ9P287 314 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNX17-204ENST00000453453 GBF1Q92538 1859 aa16.53■□□□□ 0.24
SNX17-204ENST00000453453 SIGLEC16A6NMB1 481 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 TMEM110-MUSTN1A8MSY1 372 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 PIK3R2O00459 728 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 C2CD2LO14523 706 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 BUB1BO60566 1050 aaPredicted RBP16.52■□□□□ 0.24
SNX17-204ENST00000453453 FBXO21O94952 628 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 CALRP27797 417 aaKnown RBP16.52■□□□□ 0.24
SNX17-204ENST00000453453 BMPR1AP36894 532 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 GRIK1P39086 918 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 MAGEA11P43364 429 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 MESDQ14696 234 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 DENND2CQ68D51 928 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 SLC8B1Q6J4K2 584 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 LLGL2Q6P1M3 1020 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 FAM183BPQ6ZVS7 135 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 KLHL23Q8NBE8 558 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 ATXN2LQ8WWM7 1075 aaKnown RBP16.52■□□□□ 0.24
SNX17-204ENST00000453453 MCEEQ96PE7 176 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 ERP44Q9BS26 406 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 NOD2Q9HC29 1040 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 ZDHHC18Q9NUE0 388 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.52■□□□□ 0.24
SNX17-204ENST00000453453 SAMD15Q9P1V8 674 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 TJP2Q9UDY2 1190 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 IP6K2Q9UHH9 426 aa16.52■□□□□ 0.24
SNX17-204ENST00000453453 MKI67P46013 3256 aaKnown RBP16.52■□□□□ 0.24
SNX17-204ENST00000453453 PLXNA4Q9HCM2 1894 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 LCHNA4D1U4 455 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 LINC01553A4QN01 128 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 TTI1O43156 1089 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 BEST1O76090 585 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 ALADP13716 330 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 DESP17661 470 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 CYP2F1P24903 491 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 SCNN1AP37088 669 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 RABGGTBP53611 331 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 SLC6A3Q01959 620 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 ADIGQ0VDE8 80 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 DDX42Q86XP3 938 aaKnown RBP eCLIP16.52■□□□□ 0.23
SNX17-204ENST00000453453 SCN4BQ8IWT1 228 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 SAMD11Q96NU1 681 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 AP1M1Q9BXS5 423 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 RHOBTB2Q9BYZ6 727 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 METTL5Q9NRN9 209 aaKnown RBP16.52■□□□□ 0.23
SNX17-204ENST00000453453 AMACRQ9UHK6 382 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 LZTS1Q9Y250 596 aa16.52■□□□□ 0.23
SNX17-204ENST00000453453 TCRBV5S1A1TA0A578 114 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms