RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 ADH5P11766 374 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 SDHBP21912 280 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 ARHGAP8P85298 464 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 CETN1Q12798 172 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 TBX2Q13207 712 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 C2orf27AQ580R0 203 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 RHBDF2Q6PJF5 856 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 GBP6Q6ZN66 633 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 WHAMMQ8TF30 809 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 GAB3Q8WWW8 586 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 SEMA4DQ92854 862 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 FAXDC2Q96IV6 333 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 ZFRQ96KR1 1074 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 PNKPQ96T60 521 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 NUP58Q9BVL2 599 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 PARD6AQ9NPB6 346 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 MYH10P35580 1976 aa18.95■□□□□ 0.62
SQSTM1-204ENST00000453046 AXIN1O15169 862 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 LRP3O75074 770 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 APBB3O95704 486 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 APODP05090 189 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 TPM1P09493 284 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 ATP5C1P36542 298 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 SLC6A11P48066 632 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 GAD2Q05329 585 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 GOLGA8FQ08AF8 430 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 GOLGA8DPQ0D2H9 430 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 EXOC3L4Q17RC7 722 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 GAB4Q2WGN9 574 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 LY6G5CQ5SRR4 150 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 PPP1R26Q5T8A7 1209 aaPredicted RBP18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 BTBD8Q5XKL5 378 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 GPRIN1Q7Z2K8 1008 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 CACNA2D4Q7Z3S7 1137 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 FAM160A2Q8N612 972 aaPredicted RBP18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 PNPLA8Q9NP80 782 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 CISHQ9NSE2 258 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 SCML2Q9UQR0 700 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 DAAM1Q9Y4D1 1078 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 CEP250Q9BV73 2442 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 DCHS1Q96JQ0 3298 aa18.94■□□□□ 0.62
SQSTM1-204ENST00000453046 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 K7EQS6 105 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 CYP26A1O43174 497 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 TBX18O95935 607 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 TGM1P22735 817 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 EIF2DP41214 584 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 ANO4Q32M45 955 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 CBWD6Q4V339 395 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 CBWD3Q5JTY5 395 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 CBWD5Q5RIA9 395 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 TSTD1Q8NFU3 115 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 USP33Q8TEY7 942 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 TMEM176AQ96HP8 235 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 PCMTD1Q96MG8 357 aaPredicted RBP18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 DUSP16Q9BY84 665 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 TTYH3Q9C0H2 523 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 PLCB1Q9NQ66 1216 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 ARHGEF4Q9NR80 690 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 SEMA4GQ9NTN9 838 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 DLL3Q9NYJ7 618 aa18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 CDV3Q9UKY7 258 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-204ENST00000453046 HHLA1C9JL84 531 aa18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 KAT7O95251 611 aa18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 GYPCP04921 128 aa18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 PGFP49763 221 aa18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 DGKEP52429 567 aa18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 KDSRQ06136 332 aa18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 KCNMA1Q12791 1236 aa18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 BBS7Q8IWZ6 715 aa18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 TATDN2Q93075 761 aa18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 LSM14BQ9BX40 385 aaKnown RBP18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 CYLDQ9NQC7 956 aa18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 NAGPAQ9UK23 515 aa18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 LSM7Q9UK45 103 aaKnown RBP18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.92■□□□□ 0.62
SQSTM1-204ENST00000453046 A0A1W2PQH9 124 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 A0A1W2PQJ5 194 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 RARGP13631 454 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 TIE1P35590 1138 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 GRIA2P42262 883 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 KIF11P52732 1056 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 SLC8A3P57103 927 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 MRPS21P82921 87 aaKnown RBP18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 PREPLQ4J6C6 727 aaPredicted RBP18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 NUDT18Q6ZVK8 323 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 TADA2BQ86TJ2 420 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 KBTBD6Q86V97 674 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 C12orf40Q86WS4 652 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 CNGA4Q8IV77 575 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 CCDC33Q8N5R6 958 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 NAT16Q8N8M0 369 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 SLC4A11Q8NBS3 891 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 NEK11Q8NG66 645 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 ARID3AQ99856 593 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 KLF16Q9BXK1 252 aaPredicted RBP18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 EDEM3Q9BZQ6 932 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 FAM124BQ9H5Z6 455 aaPredicted RBP18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 SPHK2Q9NRA0 654 aa18.91■□□□□ 0.62
SQSTM1-204ENST00000453046 OSER1Q9NX31 292 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms