RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CHST8Q9H2A9 424 aa4.99□□□□□ -1.61
LINC00393-202ENST00000452852 IKZF4Q9H2S9 585 aa4.99□□□□□ -1.61
LINC00393-202ENST00000452852 TMOD3Q9NYL9 352 aa4.99□□□□□ -1.61
LINC00393-202ENST00000452852 GGA3Q9NZ52 723 aa4.99□□□□□ -1.61
LINC00393-202ENST00000452852 FAM30AQ9NZY2 134 aa4.99□□□□□ -1.61
LINC00393-202ENST00000452852 ANKFY1Q9P2R3 1169 aa4.99□□□□□ -1.61
LINC00393-202ENST00000452852 DKK2Q9UBU2 259 aa4.99□□□□□ -1.61
LINC00393-202ENST00000452852 SCAF8Q9UPN6 1271 aaKnown RBP4.99□□□□□ -1.61
LINC00393-202ENST00000452852 ATP11BQ9Y2G3 1177 aa4.99□□□□□ -1.61
LINC00393-202ENST00000452852 MED16Q9Y2X0 877 aa4.99□□□□□ -1.61
LINC00393-202ENST00000452852 FPGT-TNNI3KV9GXZ4 949 aa4.99□□□□□ -1.61
LINC00393-202ENST00000452852 COL5A3P25940 1745 aaPredicted RBP4.98□□□□□ -1.61
LINC00393-202ENST00000452852 PYCARD-AS1I3L0S3 204 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 IPO5O00410 1097 aaKnown RBP4.98□□□□□ -1.61
LINC00393-202ENST00000452852 HNRNPDLO14979 420 aaKnown RBP4.98□□□□□ -1.61
LINC00393-202ENST00000452852 PIP5K1BO14986 540 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 POLBP06746 335 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 HSP90AB1P08238 724 aaKnown RBP4.98□□□□□ -1.61
LINC00393-202ENST00000452852 CKMT1AP12532 417 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 IL1R1P14778 569 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 DDIT3P35638 169 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 BMPR1AP36894 532 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 CARSP49589 748 aaKnown RBP4.98□□□□□ -1.61
LINC00393-202ENST00000452852 CREMQ03060 361 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 EMC10Q5UCC4 262 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 LAIR1Q6GTX8 287 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 CATSPERGQ6ZRH7 1159 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 USP49Q70CQ1 688 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 FANCBQ8NB91 859 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 GLIS1Q8NBF1 620 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 NAXEQ8NCW5 288 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 OR56A3Q8NH54 315 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 PRRX2Q99811 253 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 GDF15Q99988 308 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 ZSWIM1Q9BR11 485 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 TTPALQ9BTX7 342 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 ZNF518BQ9C0D4 1074 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 REXO4Q9GZR2 422 aaKnown RBP4.98□□□□□ -1.61
LINC00393-202ENST00000452852 C11orf54Q9H0W9 315 aaPredicted RBP4.98□□□□□ -1.61
LINC00393-202ENST00000452852 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.98□□□□□ -1.61
LINC00393-202ENST00000452852 PDP2Q9P2J9 529 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 SLC45A2Q9UMX9 530 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 ZNF831Q5JPB2 1677 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 SCN11AQ9UI33 1791 aa4.98□□□□□ -1.61
LINC00393-202ENST00000452852 NCAPD2Q15021 1401 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 N4BP2Q86UW6 1770 aaPredicted RBP4.97□□□□□ -1.61
LINC00393-202ENST00000452852 PLEKHG2Q9H7P9 1386 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 A0A087X1B8 175 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 CCDC78A2IDD5 438 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 TMEM191CA6NGB0 347 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 UNC119BA6NIH7 251 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 MARCH11A6NNE9 402 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 TISP43B9A030 160 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 B9A039 149 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 SYT5O00445 386 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 KIAA0391O15091 583 aaKnown RBP4.97□□□□□ -1.61
LINC00393-202ENST00000452852 FOXN1O15353 648 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 SNX2O60749 519 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 UNC5CO95185 931 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 CFIP05156 583 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 GJB1P08034 283 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 ELANEP08246 267 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 GCSHP23434 173 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 DDX6P26196 483 aaKnown RBP eCLIP4.97□□□□□ -1.61
LINC00393-202ENST00000452852 PSMC1P62191 440 aaKnown RBP4.97□□□□□ -1.61
LINC00393-202ENST00000452852 RESTQ13127 1097 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 PTK2BQ14289 1009 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 RAB30Q15771 203 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 PABPC1LQ4VXU2 614 aaKnown RBP4.97□□□□□ -1.61
LINC00393-202ENST00000452852 ARHGAP15Q53QZ3 475 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 DCAF12L1Q5VU92 463 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 SULT6B1Q6IMI4 303 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 RFX8Q6ZV50 586 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 RSRC2Q7L4I2 434 aaKnown RBP4.97□□□□□ -1.61
LINC00393-202ENST00000452852 MRGPRGQ86SM5 289 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 MAPKAPK5Q8IW41 473 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 ARHGEF19Q8IW93 802 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 GALNT15Q8N3T1 639 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 SLC15A4Q8N697 577 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 DNAJC5GQ8N7S2 189 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 PIGBQ92521 554 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 RILPL2Q969X0 211 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 ADAM2Q99965 735 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 CNPPD1Q9BV87 410 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 WDR11Q9BZH6 1224 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 INO80BQ9C086 356 aaPredicted RBP4.97□□□□□ -1.61
LINC00393-202ENST00000452852 SERHL2Q9H4I8 314 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 GSTO2Q9H4Y5 243 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 BRD9Q9H8M2 597 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 TM7SF3Q9NS93 570 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 SMC4Q9NTJ3 1288 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 SIDT1Q9NXL6 827 aaKnown RBP4.97□□□□□ -1.61
LINC00393-202ENST00000452852 POLKQ9UBT6 870 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 ZNF212Q9UDV6 495 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 NRBP1Q9UHY1 535 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 TBC1D30Q9Y2I9 924 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 C4AP0C0L4 1744 aa4.97□□□□□ -1.61
LINC00393-202ENST00000452852 WDR33Q9C0J8 1336 aaKnown RBP4.97□□□□□ -1.61
LINC00393-202ENST00000452852 COL4A3Q01955 1670 aa4.96□□□□□ -1.61
LINC00393-202ENST00000452852 KIF13BQ9NQT8 1826 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms