RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 YJEFN3A6XGL0 299 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 E7ENQ6 273 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 PIK3R2O00459 728 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 SOX5P35711 763 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 STAT1P42224 750 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 MAGEA9P43362 315 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 FANCCQ00597 558 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 TNK2Q07912 1038 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 C10orf120Q5SQS8 335 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 BSPRYQ5W0U4 402 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 SUMF1Q8NBK3 374 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 HPS4Q9NQG7 708 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 ST7Q9NRC1 585 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 DUS2Q9NX74 493 aaKnown RBP20.91■□□□□ 0.94
COL9A3-202ENST00000452372 CFAP97Q9P2B7 532 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 NUDT5Q9UKK9 219 aa20.91■□□□□ 0.94
COL9A3-202ENST00000452372 E2F8A0AVK6 867 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 LAMTOR5O43504 91 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 IFNAR2P48551 515 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 CSTF1Q05048 431 aaKnown RBP20.9■□□□□ 0.94
COL9A3-202ENST00000452372 RUNX3Q13761 415 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 ITPRIPL2Q3MIP1 535 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 BTBD8Q5XKL5 378 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 TRIM68Q6AZZ1 485 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 SCUBE3Q8IX30 993 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 DDX1Q92499 740 aaKnown RBP20.9■□□□□ 0.94
COL9A3-202ENST00000452372 LINC00597Q9H2U6 94 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 EBF3Q9H4W6 596 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 C8orf33Q9H7E9 229 aaPredicted RBP20.9■□□□□ 0.94
COL9A3-202ENST00000452372 ABCC13Q9NSE7 274 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 WNT6Q9Y6F9 365 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 PIAS3Q9Y6X2 628 aa20.9■□□□□ 0.94
COL9A3-202ENST00000452372 MAN2B1O00754 1011 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 SLC9A3R1O14745 358 aaPredicted RBP20.89■□□□□ 0.93
COL9A3-202ENST00000452372 GFPT2O94808 682 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 KPNA1P52294 538 aaPredicted RBP20.89■□□□□ 0.93
COL9A3-202ENST00000452372 MTAPQ13126 283 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 PDCLQ13371 301 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 EML3Q32P44 896 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 CACNA2D4Q7Z3S7 1137 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 NOP9Q86U38 636 aaKnown RBP20.89■□□□□ 0.93
COL9A3-202ENST00000452372 ZNF677Q86XU0 584 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 PASD1Q8IV76 773 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 EPS8L1Q8TE68 723 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 MSANTD3Q96H12 275 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 NOX5Q96PH1 765 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 MIS12Q9H081 205 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 MRPS17Q9Y2R5 130 aaKnown RBP20.89■□□□□ 0.93
COL9A3-202ENST00000452372 CACNA1AO00555 2505 aa20.89■□□□□ 0.93
COL9A3-202ENST00000452372 MDM4O15151 490 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 NCAM2O15394 837 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 SART1O43290 800 aaKnown RBP20.88■□□□□ 0.93
COL9A3-202ENST00000452372 ARSAP15289 507 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 CDH5P33151 784 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-202ENST00000452372 UBASH3AP57075 661 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 ZNF445P59923 1031 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 C1orf228Q6PIY5 440 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 MAMSTRQ6ZN01 415 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 RSRC2Q7L4I2 434 aaKnown RBP20.88■□□□□ 0.93
COL9A3-202ENST00000452372 ZBTB44Q8NCP5 570 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 TTC8Q8TAM2 541 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 CLEC4CQ8WTT0 213 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 ATP2A3Q93084 1043 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 PPP1R13BQ96KQ4 1090 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 PDCL3Q9H2J4 239 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 PRMT8Q9NR22 394 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-202ENST00000452372 OLA1Q9NTK5 396 aaKnown RBP20.88■□□□□ 0.93
COL9A3-202ENST00000452372 TBC1D14Q9P2M4 693 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 NDRG2Q9UN36 371 aaKnown RBP20.88■□□□□ 0.93
COL9A3-202ENST00000452372 SH3BP1Q9Y3L3 701 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 CEP83Q9Y592 693 aa20.88■□□□□ 0.93
COL9A3-202ENST00000452372 OTOL1A6NHN0 477 aaPredicted RBP20.87■□□□□ 0.93
COL9A3-202ENST00000452372 E5RJQ4 531 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 PAPSS1O43252 624 aaPredicted RBP20.87■□□□□ 0.93
COL9A3-202ENST00000452372 TDGF1P13385 188 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 SNX16P57768 344 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 COG7P83436 770 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 GOLGA8FQ08AF8 430 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 GOLGA8DPQ0D2H9 430 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 EFEMP1Q12805 493 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 TAF3Q5VWG9 929 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 ZC3H14Q6PJT7 736 aaKnown RBP20.87■□□□□ 0.93
COL9A3-202ENST00000452372 TSSK4Q6SA08 328 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 HTR3DQ70Z44 454 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 RALGPS2Q86X27 583 aaPredicted RBP20.87■□□□□ 0.93
COL9A3-202ENST00000452372 ADGRG2Q8IZP9 1017 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 DCLK2Q8N568 766 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 TMEM35BQ8NCS4 154 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 C1orf131Q8NDD1 294 aaKnown RBP20.87■□□□□ 0.93
COL9A3-202ENST00000452372 RNF139Q8WU17 664 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 FAM3CQ92520 227 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 EDEM1Q92611 657 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 WBP2Q969T9 261 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 CPXM1Q96SM3 734 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 CHRDQ9H2X0 955 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 ECT2Q9H8V3 914 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 NOCTQ9UK39 431 aaKnown RBP20.87■□□□□ 0.93
COL9A3-202ENST00000452372 MYO6Q9UM54 1294 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 DNAH14Q0VDD8 3507 aa20.87■□□□□ 0.93
COL9A3-202ENST00000452372 SPECC1L-ADORA2AF8WAN1 911 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms