RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SOWAHAQ2M3V2 549 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 OR6B2Q6IFH4 312 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 KCNT2Q6UVM3 1135 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 UNC93AQ86WB7 457 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 KLHL23Q8NBE8 558 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 RXFP2Q8WXD0 754 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 SAMD11Q96NU1 681 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 SLC4A5Q9BY07 1137 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 KANSL3Q9P2N6 904 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 PCSK1NQ9UHG2 260 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 RSPH14Q9UHP6 348 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 USP18Q9UMW8 372 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 C5orf67F2Z3F1 127 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 PIK3R2O00459 728 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 CST8O60676 142 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 RNF8O76064 485 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 CHRM1P11229 460 aaPredicted RBP11.18□□□□□ -0.62
PKP4-206ENST00000452162 LAG3P18627 525 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 MMP13P45452 471 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 RGS7P49802 495 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 ARSEP51690 589 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 BCAR1P56945 870 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 ARHGAP17Q68EM7 881 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 PMF1Q6P1K2 205 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 OLFML1Q6UWY5 402 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 ACTL9Q8TC94 416 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 TSPAN18Q96SJ8 248 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 PCDH9Q9HC56 1237 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 ALG13Q9NP73 1137 aaKnown RBP11.18□□□□□ -0.62
PKP4-206ENST00000452162 CACNG4Q9UBN1 327 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 RWDD3Q9Y3V2 267 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 BRWD1Q9NSI6 2320 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 SMIM28A0A1B0GU29 152 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 H3BNC9 293 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 DPYSL4O14531 572 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 TCEA3O75764 348 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 GABBR2O75899 941 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 ENDOD1O94919 500 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 ITGB1P05556 798 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 GALTP07902 379 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 SLCO1A2P46721 670 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 OTUD4Q01804 1114 aaKnown RBP11.17□□□□□ -0.62
PKP4-206ENST00000452162 GPM6BQ13491 265 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 KYNUQ16719 465 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 CCDC142Q17RM4 750 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 RAB6CQ53S08 254 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 SH3PXD2AQ5TCZ1 1133 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 LIMS2Q7Z4I7 341 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 TMEM110Q86TL2 294 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 NLRP14Q86W24 1093 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 TMEM173Q86WV6 379 aaPredicted RBP11.17□□□□□ -0.62
PKP4-206ENST00000452162 COLGALT2Q8IYK4 626 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 TTC13Q8NBP0 860 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 SLC35F5Q8WV83 523 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 KBTBD7Q8WVZ9 684 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 RSPH1Q8WYR4 309 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 ZNF558Q96NG5 402 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 SERPINB12Q96P63 405 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 FAM193BQ96PV7 902 aaPredicted RBP11.17□□□□□ -0.62
PKP4-206ENST00000452162 TMEM121Q9BTD3 319 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 RAB6CQ9H0N0 254 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 DPEP3Q9H4B8 488 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 FAM49BQ9NUQ9 324 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 PCDHB12Q9Y5F1 795 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 SPTBN5Q9NRC6 3674 aaKnown RBP11.17□□□□□ -0.62
PKP4-206ENST00000452162 NDUFAB1O14561 156 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 SPTLC1O15269 473 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 GRM6O15303 877 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 TRAPPC3O43617 180 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 CSPG5O95196 566 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 RB1P06400 928 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 PDGFRAP16234 1089 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 SLC11A1P49279 550 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 ALDH7A1P49419 539 aaKnown RBP11.17□□□□□ -0.62
PKP4-206ENST00000452162 SEC24CP53992 1094 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 DYNLT1P63172 113 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 DSC1Q08554 894 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 GRIK3Q13003 919 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 GPS1Q13098 491 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 LONRF1Q17RB8 773 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 C15orf59Q2T9L4 293 aaPredicted RBP11.17□□□□□ -0.62
PKP4-206ENST00000452162 CEP128Q6ZU80 1094 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 KCTD6Q8NC69 237 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 OR6B3Q8NGW1 331 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 MYCBPAPQ8TBZ2 947 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 STK32AQ8WU08 396 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 HSPH1Q92598 858 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 KHSRPQ92945 711 aaKnown RBP eCLIP11.17□□□□□ -0.626e-7■■■□□ 15.4
PKP4-206ENST00000452162 CENPTQ96BT3 561 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 PAAF1Q9BRP4 392 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 C11orf84Q9BUA3 381 aaPredicted RBP11.17□□□□□ -0.62
PKP4-206ENST00000452162 STMN4Q9H169 189 aaPredicted RBP11.17□□□□□ -0.62
PKP4-206ENST00000452162 GDAP2Q9NXN4 497 aa11.17□□□□□ -0.62
PKP4-206ENST00000452162 SAE1Q9UBE0 346 aaPredicted RBP11.17□□□□□ -0.62
PKP4-206ENST00000452162 TPX2Q9ULW0 747 aaKnown RBP11.17□□□□□ -0.62
PKP4-206ENST00000452162 F8W810 466 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 SGK1O00141 431 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 HCRTO43612 131 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 FGF18O76093 207 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 THP07101 528 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms