RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 K7EQS6 105 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 TPM3P06753 285 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 KCNA4P22459 653 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 PSEN1P49768 467 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 EOGTQ5NDL2 527 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 ANKRD40Q6AI12 368 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 ANKRD20A12PQ8NF67 263 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 SEMA4DQ92854 862 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 XPO6Q96QU8 1125 aaKnown RBP22.76■■□□□ 1.23
C9orf3-208ENST00000451893 CDK5RAP1Q96SZ6 601 aaKnown RBP22.76■■□□□ 1.23
C9orf3-208ENST00000451893 TPSD1Q9BZJ3 242 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 THAP9Q9H5L6 903 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 POLMQ9NP87 494 aaPredicted RBP22.76■■□□□ 1.23
C9orf3-208ENST00000451893 DNMT3LQ9UJW3 386 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 MMP17Q9ULZ9 603 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 ZBTB24O43167 697 aaPredicted RBP22.75■■□□□ 1.23
C9orf3-208ENST00000451893 AP5Z1O43299 807 aa22.75■■□□□ 1.23
C9orf3-208ENST00000451893 KLF8O95600 359 aaPredicted RBP22.75■■□□□ 1.23
C9orf3-208ENST00000451893 TBX18O95935 607 aa22.75■■□□□ 1.23
C9orf3-208ENST00000451893 FANCCQ00597 558 aa22.75■■□□□ 1.23
C9orf3-208ENST00000451893 CDKAL1Q5VV42 579 aa22.75■■□□□ 1.23
C9orf3-208ENST00000451893 RSRC2Q7L4I2 434 aaKnown RBP22.75■■□□□ 1.23
C9orf3-208ENST00000451893 C11orf74Q86VG3 221 aa22.75■■□□□ 1.23
C9orf3-208ENST00000451893 C12orf40Q86WS4 652 aa22.75■■□□□ 1.23
C9orf3-208ENST00000451893 FAM114A1Q8IWE2 563 aa22.75■■□□□ 1.23
C9orf3-208ENST00000451893 PGBD3Q8N328 593 aa22.75■■□□□ 1.23
C9orf3-208ENST00000451893 ALLCQ8N6M5 410 aa22.75■■□□□ 1.23
C9orf3-208ENST00000451893 TXNDC5Q8NBS9 432 aaKnown RBP22.75■■□□□ 1.23
C9orf3-208ENST00000451893 ZFRQ96KR1 1074 aaKnown RBP22.75■■□□□ 1.23
C9orf3-208ENST00000451893 HESX1Q9UBX0 185 aa22.75■■□□□ 1.23
C9orf3-208ENST00000451893 TRIM49BA6NDI0 452 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 NEDD8-MDP1E9PL57 170 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 CD19P15391 556 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 ATXN1P54253 815 aaKnown RBP22.74■■□□□ 1.23
C9orf3-208ENST00000451893 STX17P56962 302 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 CETN1Q12798 172 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 CCDC6Q16204 474 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 HSF5Q4G112 596 aaPredicted RBP22.74■■□□□ 1.23
C9orf3-208ENST00000451893 HS1BP3Q53T59 392 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 TTI2Q6NXR4 508 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 TPGS1Q6ZTW0 290 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 TRMT11Q7Z4G4 463 aaKnown RBP22.74■■□□□ 1.23
C9orf3-208ENST00000451893 MIB1Q86YT6 1006 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 ARHGAP18Q8N392 663 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 WHAMMQ8TF30 809 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 BBS2Q9BXC9 721 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 FAM124BQ9H5Z6 455 aaPredicted RBP22.74■■□□□ 1.23
C9orf3-208ENST00000451893 METTL14Q9HCE5 456 aaKnown RBP22.74■■□□□ 1.23
C9orf3-208ENST00000451893 CYLDQ9NQC7 956 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 EBF1Q9UH73 591 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 RASAL2Q9UJF2 1139 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 NUDT5Q9UKK9 219 aa22.74■■□□□ 1.23
C9orf3-208ENST00000451893 LRRC10BA6NIK2 292 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 GOLGA6L6A8MZA4 724 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 EPN2O95208 641 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 SERPINC1P01008 464 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 TGM1P22735 817 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 TNFRSF4P43489 277 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 PLA2G4AP47712 749 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 KIF11P52732 1056 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 LRMPQ12912 555 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 CRY1Q16526 586 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 GAB4Q2WGN9 574 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 CBWD6Q4V339 395 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 CBWD3Q5JTY5 395 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 CBWD5Q5RIA9 395 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 C10orf76Q5T2E6 689 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 IL31Q6EBC2 164 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 GRAMD4Q6IC98 578 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 TATDN2Q93075 761 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 SPACA7Q96KW9 195 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 ARID3AQ99856 593 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 KLF16Q9BXK1 252 aaPredicted RBP22.73■■□□□ 1.23
C9orf3-208ENST00000451893 DNAJC17Q9NVM6 304 aaKnown RBP22.73■■□□□ 1.23
C9orf3-208ENST00000451893 INVSQ9Y283 1065 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 CEP250Q9BV73 2442 aa22.73■■□□□ 1.23
C9orf3-208ENST00000451893 HHLA1C9JL84 531 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 MDM4O15151 490 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 HOXC11O43248 304 aaPredicted RBP22.72■■□□□ 1.23
C9orf3-208ENST00000451893 TULP3O75386 442 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 TBXAS1P24557 533 aaPredicted RBP22.72■■□□□ 1.23
C9orf3-208ENST00000451893 EEF1GP26641 437 aaKnown RBP22.72■■□□□ 1.23
C9orf3-208ENST00000451893 UBASH3AP57075 661 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 CREB5Q02930 508 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 CUL2Q13617 745 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 PLK5Q496M5 336 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 SGO2Q562F6 1265 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 SDE2Q6IQ49 451 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 HTR3DQ70Z44 454 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 CCDC186Q7Z3E2 898 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 TMEM25Q86YD3 366 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 ZNF513Q8N8E2 541 aaPredicted RBP22.72■■□□□ 1.23
C9orf3-208ENST00000451893 SLC4A11Q8NBS3 891 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 NMUR1Q9HB89 426 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 SAMSN1Q9NSI8 373 aaKnown RBP22.72■■□□□ 1.23
C9orf3-208ENST00000451893 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.72■■□□□ 1.23
C9orf3-208ENST00000451893 WDR35Q9P2L0 1181 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 STRIP2Q9ULQ0 834 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 PCDHGA5Q9Y5G8 931 aa22.72■■□□□ 1.23
C9orf3-208ENST00000451893 WDR87Q6ZQQ6 2873 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms