RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 WDR35Q9P2L0 1181 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 ZNF510Q9Y2H8 683 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHD3-205ENST00000449744 MYOFQ9NZM1 2061 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 DMDP11532 3685 aa16.04■□□□□ 0.16
CHD3-205ENST00000449744 KIAA1549LQ6ZVL6 1849 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 ANTXRLA6NF34 631 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 GREM1O60565 184 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 STC2O76061 302 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 AFPP02771 609 aaKnown RBP16.03■□□□□ 0.16
CHD3-205ENST00000449744 PAEPP09466 180 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 SETSIPP0DME0 302 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 TGM1P22735 817 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 MESP2Q0VG99 397 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 KCNH2Q12809 1159 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 USP39Q53GS9 565 aaKnown RBP16.03■□□□□ 0.16
CHD3-205ENST00000449744 C10orf76Q5T2E6 689 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 EMC10Q5UCC4 262 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 GRAMD4Q6IC98 578 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 ANO7Q6IWH7 933 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 KBTBD6Q86V97 674 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 SFTPA1Q8IWL2 248 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 TRIM59Q8IWR1 403 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 SIX6OS1Q8N1H7 587 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 UBR7Q8N806 425 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 TERB1Q8NA31 727 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 IL17RCQ8NAC3 791 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 UBA3Q8TBC4 463 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 LOXL4Q96JB6 756 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 ULBP1Q9BZM6 244 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 DCLK3Q9C098 648 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 POLMQ9NP87 494 aaPredicted RBP16.03■□□□□ 0.16
CHD3-205ENST00000449744 DNAJC17Q9NVM6 304 aaKnown RBP16.03■□□□□ 0.16
CHD3-205ENST00000449744 MARK1Q9P0L2 795 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 KIAA1468Q9P260 1216 aa16.03■□□□□ 0.16
CHD3-205ENST00000449744 CDV3Q9UKY7 258 aaKnown RBP16.03■□□□□ 0.16
CHD3-205ENST00000449744 TULP2O00295 520 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 O00370 1275 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 FOXD2O60548 495 aaPredicted RBP16.02■□□□□ 0.16
CHD3-205ENST00000449744 RHOBTB1O94844 696 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 HMBSP08397 361 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 TYRP14679 529 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 GBP1P32455 592 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 KIR2DL1P43626 348 aaPredicted RBP16.02■□□□□ 0.16
CHD3-205ENST00000449744 ADIGQ0VDE8 80 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 ELF2Q15723 593 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 CSRP2Q16527 193 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 PM20D1Q6GTS8 502 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 RRAGAQ7L523 313 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 TRMT11Q7Z4G4 463 aaKnown RBP16.02■□□□□ 0.16
CHD3-205ENST00000449744 CREBRFQ8IUR6 639 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 PHTF2Q8N3S3 785 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 ZNF513Q8N8E2 541 aaPredicted RBP16.02■□□□□ 0.16
CHD3-205ENST00000449744 EHBP1Q8NDI1 1231 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 KCNV2Q8TDN2 545 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 RNF139Q8WU17 664 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 CNOT6LQ96LI5 555 aaKnown RBP16.02■□□□□ 0.16
CHD3-205ENST00000449744 TPSD1Q9BZJ3 242 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 ARRDC1-AS1Q9H2J1 176 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 OLA1Q9NTK5 396 aaKnown RBP16.02■□□□□ 0.16
CHD3-205ENST00000449744 DLL3Q9NYJ7 618 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 MARCH2Q9P0N8 246 aa16.02■□□□□ 0.16
CHD3-205ENST00000449744 SLC12A8A0AV02 714 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 SGK1O00141 431 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 CACNG3O60359 315 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 EPN2O95208 641 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 CORO1AP31146 461 aaKnown RBP16.01■□□□□ 0.15
CHD3-205ENST00000449744 CHKAP35790 457 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 MARSP56192 900 aaKnown RBP16.01■□□□□ 0.15
CHD3-205ENST00000449744 GCNT1Q02742 428 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 STILQ15468 1287 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 PLK5Q496M5 336 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 LCLAT1Q6UWP7 414 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 TMEM92Q6UXU6 159 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 Q6ZNB5 142 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 PRR23CQ6ZRP0 262 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 C11orf74Q86VG3 221 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 RASSF3Q86WH2 238 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 RBBP8NLQ8NC74 664 aaPredicted RBP16.01■□□□□ 0.15
CHD3-205ENST00000449744 LMO3Q8TAP4 145 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 KCTD13Q8WZ19 329 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 KAT5Q92993 513 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 ZC3H10Q96K80 434 aaKnown RBP16.01■□□□□ 0.15
CHD3-205ENST00000449744 ZDHHC4Q9NPG8 344 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 BCCIPQ9P287 314 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHD3-205ENST00000449744 RWDD2AQ9UIY3 292 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.01■□□□□ 0.15
CHD3-205ENST00000449744 ZNF292O60281 2723 aa16.01■□□□□ 0.15
CHD3-205ENST00000449744 M0QYV0 167 aa16■□□□□ 0.15
CHD3-205ENST00000449744 DCLK1O15075 740 aa16■□□□□ 0.15
CHD3-205ENST00000449744 LCP1P13796 627 aa16■□□□□ 0.15
CHD3-205ENST00000449744 DGKGP49619 791 aa16■□□□□ 0.15
CHD3-205ENST00000449744 CNGA2Q16280 664 aa16■□□□□ 0.15
CHD3-205ENST00000449744 SDE2Q6IQ49 451 aa16■□□□□ 0.15
CHD3-205ENST00000449744 ARHGEF19Q8IW93 802 aa16■□□□□ 0.15
CHD3-205ENST00000449744 PGBD3Q8N328 593 aa16■□□□□ 0.15
CHD3-205ENST00000449744 C12orf50Q8NA57 414 aaPredicted RBP16■□□□□ 0.15
CHD3-205ENST00000449744 MDGA1Q8NFP4 955 aa16■□□□□ 0.15
CHD3-205ENST00000449744 TFAP2BQ92481 460 aa16■□□□□ 0.15
CHD3-205ENST00000449744 NDRG1Q92597 394 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms