RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 SEMA4GQ9NTN9 838 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 CHMP5Q9NZZ3 219 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 EBF1Q9UH73 591 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 KIAA1257Q9ULG3 409 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.59■□□□□ 0.57
DDX56-207ENST00000448192 CEP250Q9BV73 2442 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 PRR5-ARHGAP8B1AHC4 643 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 XPO1O14980 1071 aaKnown RBP18.58■□□□□ 0.56
DDX56-207ENST00000448192 DCLK1O15075 740 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 TRIM24O15164 1050 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 PMM2O15305 246 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 STC2O76061 302 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 ZBED1O96006 694 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 TYRP14679 529 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 ARHGAP8P85298 464 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 BST2Q10589 180 aaKnown RBP18.58■□□□□ 0.56
DDX56-207ENST00000448192 KCNH2Q12809 1159 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 CRY1Q16526 586 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 ANO7Q6IWH7 933 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 NUDT18Q6ZVK8 323 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 ERMP1Q7Z2K6 904 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 TRIM59Q8IWR1 403 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 NDRG1Q92597 394 aaKnown RBP18.58■□□□□ 0.56
DDX56-207ENST00000448192 XPO6Q96QU8 1125 aaKnown RBP18.58■□□□□ 0.56
DDX56-207ENST00000448192 TPSD1Q9BZJ3 242 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 ULBP1Q9BZM6 244 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 ARRDC1-AS1Q9H2J1 176 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 DNAJC17Q9NVM6 304 aaKnown RBP18.58■□□□□ 0.56
DDX56-207ENST00000448192 KIAA1468Q9P260 1216 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 WDR35Q9P2L0 1181 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 INVSQ9Y283 1065 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.58■□□□□ 0.56
DDX56-207ENST00000448192 SDK1Q7Z5N4 2213 aa18.58■□□□□ 0.56
DDX56-207ENST00000448192 MYO18AQ92614 2054 aaKnown RBP18.58■□□□□ 0.56
DDX56-207ENST00000448192 SGK1O00141 431 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 O00370 1275 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 P4HA2O15460 535 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 KIR2DL1P43626 348 aaPredicted RBP18.57■□□□□ 0.56
DDX56-207ENST00000448192 COG7P83436 770 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 ADIGQ0VDE8 80 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 CSRP2Q16527 193 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 EOGTQ5NDL2 527 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 C10orf76Q5T2E6 689 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 GRAMD4Q6IC98 578 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 TMEM92Q6UXU6 159 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 RRAGAQ7L523 313 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 DGLUCYQ7Z3D6 616 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 TRIML1Q8N9V2 468 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 TERB1Q8NA31 727 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 EHBP1Q8NDI1 1231 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 LMO3Q8TAP4 145 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 KAT5Q92993 513 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 BHMTQ93088 406 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 IPO9Q96P70 1041 aaKnown RBP18.57■□□□□ 0.56
DDX56-207ENST00000448192 DLL3Q9NYJ7 618 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 MARCH2Q9P0N8 246 aa18.57■□□□□ 0.56
DDX56-207ENST00000448192 CDV3Q9UKY7 258 aaKnown RBP18.57■□□□□ 0.56
DDX56-207ENST00000448192 RNF225M0QZC1 329 aaPredicted RBP18.56■□□□□ 0.56
DDX56-207ENST00000448192 ALDH1A2O94788 518 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 FGFR1OPO95684 399 aaKnown RBP18.56■□□□□ 0.56
DDX56-207ENST00000448192 AFPP02771 609 aaKnown RBP18.56■□□□□ 0.56
DDX56-207ENST00000448192 PAEPP09466 180 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 HNRNPLP14866 589 aaKnown RBP eCLIP18.56■□□□□ 0.56
DDX56-207ENST00000448192 SDHBP21912 280 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 GBP1P32455 592 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 FOXK2Q01167 660 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 CCDC6Q16204 474 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 PLK5Q496M5 336 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 HSF5Q4G112 596 aaPredicted RBP18.56■□□□□ 0.56
DDX56-207ENST00000448192 USP39Q53GS9 565 aaKnown RBP18.56■□□□□ 0.56
DDX56-207ENST00000448192 PM20D1Q6GTS8 502 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 Q6ZNB5 142 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 PRR23CQ6ZRP0 262 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 CREBRFQ8IUR6 639 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 ARHGEF19Q8IW93 802 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 SIX6OS1Q8N1H7 587 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 ZNF513Q8N8E2 541 aaPredicted RBP18.56■□□□□ 0.56
DDX56-207ENST00000448192 TFAP2BQ92481 460 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 LOXL4Q96JB6 756 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 ZC3H10Q96K80 434 aaKnown RBP18.56■□□□□ 0.56
DDX56-207ENST00000448192 DCLK3Q9C098 648 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 PLK2Q9NYY3 685 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 MARK1Q9P0L2 795 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 STRIP2Q9ULQ0 834 aa18.56■□□□□ 0.56
DDX56-207ENST00000448192 SLC12A8A0AV02 714 aa18.55■□□□□ 0.56
DDX56-207ENST00000448192 CACNG3O60359 315 aa18.55■□□□□ 0.56
DDX56-207ENST00000448192 EPN2O95208 641 aa18.55■□□□□ 0.56
DDX56-207ENST00000448192 CALCAP01258 141 aa18.55■□□□□ 0.56
DDX56-207ENST00000448192 KLKB1P03952 638 aa18.55■□□□□ 0.56
DDX56-207ENST00000448192 SETSIPP0DME0 302 aa18.55■□□□□ 0.56
DDX56-207ENST00000448192 CHRM1P11229 460 aaPredicted RBP18.55■□□□□ 0.56
DDX56-207ENST00000448192 LCP1P13796 627 aa18.55■□□□□ 0.56
DDX56-207ENST00000448192 CORO1AP31146 461 aaKnown RBP18.55■□□□□ 0.56
DDX56-207ENST00000448192 MARSP56192 900 aaKnown RBP18.55■□□□□ 0.56
DDX56-207ENST00000448192 ELF2Q15723 593 aa18.55■□□□□ 0.56
DDX56-207ENST00000448192 LCLAT1Q6UWP7 414 aa18.55■□□□□ 0.56
DDX56-207ENST00000448192 RASSF3Q86WH2 238 aa18.55■□□□□ 0.56
DDX56-207ENST00000448192 RBBP8NLQ8NC74 664 aaPredicted RBP18.55■□□□□ 0.56
DDX56-207ENST00000448192 MDGA1Q8NFP4 955 aa18.55■□□□□ 0.56
DDX56-207ENST00000448192 CNOT6LQ96LI5 555 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms