RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 SLC12A8A0AV02 714 aa26.17■■□□□ 1.78
UFD1-204ENST00000447868 SYCE3A1L190 88 aa26.17■■□□□ 1.78
UFD1-204ENST00000447868 STC2O76061 302 aa26.17■■□□□ 1.78
UFD1-204ENST00000447868 ADH5P11766 374 aa26.17■■□□□ 1.78
UFD1-204ENST00000447868 CSTF1Q05048 431 aaKnown RBP26.17■■□□□ 1.78
UFD1-204ENST00000447868 GAS6Q14393 721 aa26.17■■□□□ 1.78
UFD1-204ENST00000447868 MEA1Q16626 185 aa26.17■■□□□ 1.78
UFD1-204ENST00000447868 GAB4Q2WGN9 574 aa26.17■■□□□ 1.78
UFD1-204ENST00000447868 PASD1Q8IV76 773 aa26.17■■□□□ 1.78
UFD1-204ENST00000447868 FAM71AQ8IYT1 594 aa26.17■■□□□ 1.78
UFD1-204ENST00000447868 IRGQQ8WZA9 623 aa26.17■■□□□ 1.78
UFD1-204ENST00000447868 BPIFA3Q9BQP9 254 aa26.17■■□□□ 1.78
UFD1-204ENST00000447868 NAA15Q9BXJ9 866 aaKnown RBP26.17■■□□□ 1.78
UFD1-204ENST00000447868 ABCC13Q9NSE7 274 aa26.17■■□□□ 1.78
UFD1-204ENST00000447868 FAM207AQ9NSI2 230 aaPredicted RBP26.17■■□□□ 1.78
UFD1-204ENST00000447868 CACNA1HO95180 2353 aa26.16■■□□□ 1.78
UFD1-204ENST00000447868 FBXO21O94952 628 aa26.16■■□□□ 1.78
UFD1-204ENST00000447868 SP9P0CG40 484 aa26.16■■□□□ 1.78
UFD1-204ENST00000447868 ATP1A3P13637 1013 aa26.16■■□□□ 1.78
UFD1-204ENST00000447868 DRD1P21728 446 aa26.16■■□□□ 1.78
UFD1-204ENST00000447868 OPRD1P41143 372 aa26.16■■□□□ 1.78
UFD1-204ENST00000447868 COG7P83436 770 aa26.16■■□□□ 1.78
UFD1-204ENST00000447868 DHX40Q8IX18 779 aaKnown RBP26.16■■□□□ 1.78
UFD1-204ENST00000447868 SCUBE3Q8IX30 993 aa26.16■■□□□ 1.78
UFD1-204ENST00000447868 PCMTD1Q96MG8 357 aaPredicted RBP26.16■■□□□ 1.78
UFD1-204ENST00000447868 IER2Q9BTL4 223 aa26.16■■□□□ 1.78
UFD1-204ENST00000447868 PLCB1Q9NQ66 1216 aa26.16■■□□□ 1.78
UFD1-204ENST00000447868 SPHK2Q9NRA0 654 aa26.16■■□□□ 1.78
UFD1-204ENST00000447868 OLA1Q9NTK5 396 aaKnown RBP26.16■■□□□ 1.78
UFD1-204ENST00000447868 LGALS16A8MUM7 142 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 ACADSBP45954 432 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 SLC6A11P48066 632 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 RPL34P49207 117 aaKnown RBP26.15■■□□□ 1.78
UFD1-204ENST00000447868 UBXN1Q04323 297 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 ANO4Q32M45 955 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 TSSK4Q6SA08 328 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 TMEM25Q86YD3 366 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 FMNL3Q8IVF7 1028 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 SYNPOQ8N3V7 929 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 STK32AQ8WU08 396 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 GOLGA1Q92805 767 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 FUCA2Q9BTY2 467 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 SLC4A5Q9BY07 1137 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 GANQ9H2C0 597 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 SFMBT1Q9UHJ3 866 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 ATG2BQ96BY7 2078 aa26.15■■□□□ 1.78
UFD1-204ENST00000447868 SMTNL1A8MU46 457 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 LTFP02788 710 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 KRT9P35527 623 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 ZNF165P49910 485 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 BPIFB4P59827 614 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 GAD2Q05329 585 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 PDCLQ13371 301 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 SYCP1Q15431 976 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 SMYD5Q6GMV2 418 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 Q6ZNB5 142 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 C12orf40Q86WS4 652 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 SPEM1Q8N4L4 309 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 STK33Q9BYT3 514 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 FBXO4Q9UKT5 387 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 PCDHGC3Q9UN70 934 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 SIK3Q9Y2K2 1263 aa26.14■■□□□ 1.78
UFD1-204ENST00000447868 E5RJQ4 531 aa26.13■■□□□ 1.77
UFD1-204ENST00000447868 KLKB1P03952 638 aa26.13■■□□□ 1.77
UFD1-204ENST00000447868 CORO1AP31146 461 aaKnown RBP26.13■■□□□ 1.77
UFD1-204ENST00000447868 CCR3P51677 355 aa26.13■■□□□ 1.77
UFD1-204ENST00000447868 POLR2FP61218 127 aaKnown RBP26.13■■□□□ 1.77
UFD1-204ENST00000447868 SATB1Q01826 763 aa26.13■■□□□ 1.77
UFD1-204ENST00000447868 TPGS1Q6ZTW0 290 aa26.13■■□□□ 1.77
UFD1-204ENST00000447868 APTXQ7Z2E3 356 aaKnown RBP26.13■■□□□ 1.77
UFD1-204ENST00000447868 WDTC1Q8N5D0 677 aa26.13■■□□□ 1.77
UFD1-204ENST00000447868 NAT16Q8N8M0 369 aa26.13■■□□□ 1.77
UFD1-204ENST00000447868 EZH1Q92800 747 aaPredicted RBP26.13■■□□□ 1.77
UFD1-204ENST00000447868 PRMT8Q9NR22 394 aaPredicted RBP26.13■■□□□ 1.77
UFD1-204ENST00000447868 LRRC10BA6NIK2 292 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 F8VZ95 297 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 EPHB6O15197 1021 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 RNF40O75150 1001 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 CXCL12P48061 93 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 PKN3Q6P5Z2 889 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 DENND1CQ8IV53 801 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 C1orf131Q8NDD1 294 aaKnown RBP26.12■■□□□ 1.77
UFD1-204ENST00000447868 FAM149B1Q96BN6 582 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 DCLK3Q9C098 648 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 PDCL3Q9H2J4 239 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 NLRC4Q9NPP4 1024 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 C2orf42Q9NWW7 574 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 TJP2Q9UDY2 1190 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 ZNF510Q9Y2H8 683 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 R4GN57 208 aa26.12■■□□□ 1.77
UFD1-204ENST00000447868 NEDD8-MDP1E9PL57 170 aa26.11■■□□□ 1.77
UFD1-204ENST00000447868 HOXC11O43248 304 aaPredicted RBP26.11■■□□□ 1.77
UFD1-204ENST00000447868 PAPSS1O43252 624 aaPredicted RBP26.11■■□□□ 1.77
UFD1-204ENST00000447868 SART1O43290 800 aaKnown RBP26.11■■□□□ 1.77
UFD1-204ENST00000447868 MSI1O43347 362 aaKnown RBP26.11■■□□□ 1.77
UFD1-204ENST00000447868 CYP11B1P15538 503 aa26.11■■□□□ 1.77
UFD1-204ENST00000447868 KDSRQ06136 332 aa26.11■■□□□ 1.77
UFD1-204ENST00000447868 TAF3Q5VWG9 929 aa26.11■■□□□ 1.77
UFD1-204ENST00000447868 MAMSTRQ6ZN01 415 aa26.11■■□□□ 1.77
UFD1-204ENST00000447868 TMEM110Q86TL2 294 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms