RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 PRRT4C9JH25 899 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 F8VP50 259 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 COCHO43405 550 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 HCRTO43612 131 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 DFNA5O60443 496 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 ATP2C2O75185 946 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 FAM13AO94988 1023 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 PLCG1P19174 1290 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 LMO2P25791 158 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 YWHAQP27348 245 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 ADSSP30520 456 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 CSNK1EP49674 416 aaKnown RBP7.52□□□□□ -1.21
LRRC28-203ENST00000447360 TUBP50607 506 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 TOB1P50616 345 aaPredicted RBP7.52□□□□□ -1.21
LRRC28-203ENST00000447360 CCT8P50990 548 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 TPMTP51580 245 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 HMGN5P82970 282 aaKnown RBP7.52□□□□□ -1.21
LRRC28-203ENST00000447360 RHDQ02161 417 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 CYP27A1Q02318 531 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 E2F5Q15329 346 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 TEAD4Q15561 434 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 FUT11Q495W5 492 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 TAF1BQ53T94 588 aaPredicted RBP7.52□□□□□ -1.21
LRRC28-203ENST00000447360 CCDC157Q569K6 752 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 HECTD3Q5T447 861 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 HTR3DQ70Z44 454 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 CSGALNACT2Q8N6G5 542 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 MYCBPAPQ8TBZ2 947 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 KBTBD7Q8WVZ9 684 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 POMGNT1Q8WZA1 660 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 PCED1BQ96HM7 432 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 TMEM176AQ96HP8 235 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 CDK5RAP3Q96JB5 506 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 TMX3Q96JJ7 454 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 MKRN2Q9H000 416 aaKnown RBP7.52□□□□□ -1.21
LRRC28-203ENST00000447360 PRM3Q9NNZ6 103 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 CRTAC1Q9NQ79 661 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 MARK1Q9P0L2 795 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 FTSJ1Q9UET6 329 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 ANKRD6Q9Y2G4 727 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 SNX11Q9Y5W9 270 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 USP9XQ93008 2570 aaPredicted RBP7.52□□□□□ -1.21
LRRC28-203ENST00000447360 UBR5O95071 2799 aaPredicted RBP7.51□□□□□ -1.21
LRRC28-203ENST00000447360 HELZP42694 1942 aaKnown RBP7.51□□□□□ -1.21
LRRC28-203ENST00000447360 KCNJ18B7U540 433 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 TISP43B9A030 160 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 WASH3PC4AMC7 463 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 NEDD8-MDP1E9PL57 170 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 SLC26A4O43511 780 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 RTN3O95197 1032 aaPredicted RBP7.51□□□□□ -1.21
LRRC28-203ENST00000447360 WISP1O95388 367 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 KRT19P08727 400 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 CISD3P0C7P0 127 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 TYRP14679 529 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 IL12RB1P42701 662 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 GRIA4P48058 902 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 PSMC1P62191 440 aaKnown RBP7.51□□□□□ -1.21
LRRC28-203ENST00000447360 CXADRP78310 365 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 TARDBPQ13148 414 aaKnown RBP eCLIP7.51□□□□□ -1.21
LRRC28-203ENST00000447360 ORC1Q13415 861 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 ENPP2Q13822 863 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 TUSC1Q2TAM9 212 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 TMEM119Q4V9L6 283 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 PKDCCQ504Y2 493 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 GPBP1Q86WP2 473 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 TMPRSS6Q8IU80 811 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 BRSK2Q8IWQ3 736 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 NUP93Q8N1F7 819 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 CACTIN-AS1Q8N1I8 211 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 FAM181AQ8N9Y4 354 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 FAM184AQ8NB25 1140 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 PRCCQ92733 491 aaPredicted RBP7.51□□□□□ -1.21
LRRC28-203ENST00000447360 HVCN1Q96D96 273 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 ERLEC1Q96DZ1 483 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 SIPA1Q96FS4 1042 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 PLIN2Q99541 437 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 BBS2Q9BXC9 721 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 BACH2Q9BYV9 841 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 ELOVL4Q9GZR5 314 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.51□□□□□ -1.217e-8■■■■■ 186.3
LRRC28-203ENST00000447360 SIX4Q9UIU6 781 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 DNMT3LQ9UJW3 386 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 R3HCC1Q9Y3T6 440 aaKnown RBP7.51□□□□□ -1.21
LRRC28-203ENST00000447360 STON1Q9Y6Q2 735 aa7.51□□□□□ -1.21
LRRC28-203ENST00000447360 BOD1L1Q8NFC6 3051 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 ANAPC1Q9H1A4 1944 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 ENC1O14682 589 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 SYNCRIPO60506 623 aaKnown RBP7.5□□□□□ -1.21
LRRC28-203ENST00000447360 GREM1O60565 184 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 TBCAO75347 108 aaKnown RBP7.5□□□□□ -1.21
LRRC28-203ENST00000447360 RFPL3O75679 317 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 LDHAP00338 332 aaKnown RBP7.5□□□□□ -1.21
LRRC28-203ENST00000447360 PDGFRBP09619 1106 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 FAM163BP0C2L3 166 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 ACADMP11310 421 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 C6P13671 934 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 ACO1P21399 889 aaKnown RBP7.5□□□□□ -1.21
LRRC28-203ENST00000447360 WARSP23381 471 aaKnown RBP7.5□□□□□ -1.21
LRRC28-203ENST00000447360 ACTN2P35609 894 aa7.5□□□□□ -1.21
LRRC28-203ENST00000447360 DGKGP49619 791 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms