RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 WDTC1Q8N5D0 677 aa15.54■□□□□ 0.08
HDAC4-204ENST00000446876 C1orf131Q8NDD1 294 aaKnown RBP15.54■□□□□ 0.08
HDAC4-204ENST00000446876 PCMTD1Q96MG8 357 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-204ENST00000446876 PHOX2BQ99453 314 aa15.54■□□□□ 0.08
HDAC4-204ENST00000446876 P2RY13Q9BPV8 354 aa15.54■□□□□ 0.08
HDAC4-204ENST00000446876 CHRDQ9H2X0 955 aa15.54■□□□□ 0.08
HDAC4-204ENST00000446876 NLRC4Q9NPP4 1024 aa15.54■□□□□ 0.08
HDAC4-204ENST00000446876 TBC1D14Q9P2M4 693 aa15.54■□□□□ 0.08
HDAC4-204ENST00000446876 SFMBT1Q9UHJ3 866 aa15.54■□□□□ 0.08
HDAC4-204ENST00000446876 ARIH1Q9Y4X5 557 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-204ENST00000446876 SLC12A8A0AV02 714 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 TRDMT1O14717 391 aaKnown RBP15.53■□□□□ 0.08
HDAC4-204ENST00000446876 MSI1O43347 362 aaKnown RBP15.53■□□□□ 0.08
HDAC4-204ENST00000446876 LTFP02788 710 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 KLKB1P03952 638 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 ADH5P11766 374 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 OPRD1P41143 372 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 MAGEA9P43362 315 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 RPL34P49207 117 aaKnown RBP15.53■□□□□ 0.08
HDAC4-204ENST00000446876 GOLGA8FQ08AF8 430 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 GOLGA8DPQ0D2H9 430 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 NR1H3Q13133 447 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 LRRC32Q14392 662 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 IQCB1Q15051 598 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 MEA1Q16626 185 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 ZSCAN23Q3MJ62 389 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 TAF3Q5VWG9 929 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 HTR3DQ70Z44 454 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 FMNL3Q8IVF7 1028 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 SCUBE3Q8IX30 993 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 SCML4Q8N228 414 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 KIAA1958Q8N8K9 716 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 EZH1Q92800 747 aaPredicted RBP15.53■□□□□ 0.08
HDAC4-204ENST00000446876 ATOH1Q92858 354 aaPredicted RBP15.53■□□□□ 0.08
HDAC4-204ENST00000446876 CD101Q93033 1021 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 CDK5RAP1Q96SZ6 601 aaKnown RBP15.53■□□□□ 0.08
HDAC4-204ENST00000446876 SLC4A5Q9BY07 1137 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 STK33Q9BYT3 514 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 C2orf42Q9NWW7 574 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 LSM7Q9UK45 103 aaKnown RBP15.53■□□□□ 0.08
HDAC4-204ENST00000446876 PCDHGC3Q9UN70 934 aa15.53■□□□□ 0.08
HDAC4-204ENST00000446876 CACNA1HO95180 2353 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 ANTXRLA6NF34 631 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 LRRC10BA6NIK2 292 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 SMTNL1A8MU46 457 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 TEX33O43247 280 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 PAPSS1O43252 624 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-204ENST00000446876 GFPT2O94808 682 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 FBXO21O94952 628 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 ADH1CP00326 375 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 CYP11B1P15538 503 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 PLA2G5P39877 138 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 SLC6A11P48066 632 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 AMPD2Q01433 879 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 MESP2Q0VG99 397 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 GRSF1Q12849 480 aaKnown RBP eCLIP15.52■□□□□ 0.08
HDAC4-204ENST00000446876 PKN3Q6P5Z2 889 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 TSSK4Q6SA08 328 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 Q6ZNB5 142 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 NOP9Q86U38 636 aaKnown RBP15.52■□□□□ 0.08
HDAC4-204ENST00000446876 TMEM25Q86YD3 366 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 SFTPA1Q8IWL2 248 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 RNF139Q8WU17 664 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 IRGQQ8WZA9 623 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 PIWIL1Q96J94 861 aaKnown RBP15.52■□□□□ 0.08
HDAC4-204ENST00000446876 CPXM1Q96SM3 734 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 CBX8Q9HC52 389 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 SPHK2Q9NRA0 654 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 ABCC13Q9NSE7 274 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 STRIP2Q9ULQ0 834 aa15.52■□□□□ 0.08
HDAC4-204ENST00000446876 LAMTOR5O43504 91 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 FYNP06241 537 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 CORO1AP31146 461 aaKnown RBP15.51■□□□□ 0.07
HDAC4-204ENST00000446876 HOXC13P31276 330 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 KRT9P35527 623 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 ACADSBP45954 432 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 JAM2P57087 298 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 COG7P83436 770 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 SATB1Q01826 763 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 KDSRQ06136 332 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 ANO4Q32M45 955 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 DGKKQ5KSL6 1271 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 TPGS1Q6ZTW0 290 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 LUZP1Q86V48 1076 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 NAT16Q8N8M0 369 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 NEK11Q8NG66 645 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 STK32AQ8WU08 396 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 SLC20A1Q8WUM9 679 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 FAM149B1Q96BN6 582 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 OTUB2Q96DC9 234 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 FAM122AQ96E09 287 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 P2RY11Q96G91 374 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 ERGIC2Q96RQ1 377 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 OLA1Q9NTK5 396 aaKnown RBP15.51■□□□□ 0.07
HDAC4-204ENST00000446876 FANCMQ8IYD8 2048 aa15.51■□□□□ 0.07
HDAC4-204ENST00000446876 RNF40O75150 1001 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 ERBB2P04626 1255 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 SP9P0CG40 484 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 BPIFB4P59827 614 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 CSTF1Q05048 431 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms