RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.8□□□□□ -1
PTPN3-204ENST00000446349 KRT6AP02538 564 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 KRT6BP04259 564 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 KELP23276 732 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 RRM2P31350 389 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 KRT6CP48668 564 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 FAM110CQ1W6H9 321 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 LRRC43Q8N309 656 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 P2RX7Q99572 595 aaKnown RBP8.8□□□□□ -1
PTPN3-204ENST00000446349 INTS13Q9NVM9 706 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 ABCC6O95255 1503 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 A0A087WWV3 80 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 OR6C75A6NL08 312 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 CES2O00748 559 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 RAD51BO15315 384 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 PMPCBO75439 489 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 ARP10275 920 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 LAG3P18627 525 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 CRABP2P29373 138 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 THOP1P52888 689 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 PURAQ00577 322 aaKnown RBP8.8□□□□□ -1
PTPN3-204ENST00000446349 PAGE2BQ5JRK9 111 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 MFSD4BQ5TF39 518 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 SCARA3Q6AZY7 606 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 HIBCHQ6NVY1 386 aaPredicted RBP8.8□□□□□ -1
PTPN3-204ENST00000446349 FAM162AQ96A26 154 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 SENP2Q9HC62 589 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 NEK6Q9HC98 313 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 WARS2Q9UGM6 360 aaKnown RBP8.8□□□□□ -1
PTPN3-204ENST00000446349 POLG2Q9UHN1 485 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 FBXL5Q9UKA1 691 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 MGAT4DA6NG13 374 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 URADA6NGE7 173 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 ERN1O75460 977 aaKnown RBP8.8□□□□□ -1
PTPN3-204ENST00000446349 PCSK2P16519 638 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 SOAT1P35610 550 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 RTP1P59025 263 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 SEC23AQ15436 765 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 MIB1Q86YT6 1006 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 AGGF1Q8N302 714 aaeCLIP8.8□□□□□ -1
PTPN3-204ENST00000446349 TPCN2Q8NHX9 752 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 FAM172AQ8WUF8 416 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 RUSC1Q9BVN2 902 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 SMYD3Q9H7B4 428 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 TEX33O43247 280 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 ZNF862O60290 1169 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 GCATO75600 419 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 ADH1CP00326 375 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 COILP38432 576 aaPredicted RBP8.8□□□□□ -1
PTPN3-204ENST00000446349 GRB10Q13322 594 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 FNDC3BQ53EP0 1204 aaKnown RBP8.8□□□□□ -1
PTPN3-204ENST00000446349 BEND6Q5SZJ8 279 aaPredicted RBP8.8□□□□□ -1
PTPN3-204ENST00000446349 ZNF248Q8NDW4 579 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 APOL5Q9BWW9 433 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 CHGBP05060 677 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 EIF2S1P05198 315 aaKnown RBP8.8□□□□□ -1
PTPN3-204ENST00000446349 GPC1P35052 558 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 YWHAZP63104 245 aaKnown RBP8.8□□□□□ -1
PTPN3-204ENST00000446349 BCL2L1Q07817 233 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 DMC1Q14565 340 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 ATAD3BQ5T9A4 648 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 TMA16Q96EY4 203 aaKnown RBP8.8□□□□□ -1
PTPN3-204ENST00000446349 PORCNQ9H237 461 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 RPS6KL1Q9Y6S9 549 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 CAPN15O75808 1086 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 EIF4BP23588 611 aaKnown RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 GRK2P25098 689 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 RPL3P39023 403 aaKnown RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 RARRES1P49788 294 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 AIF1P55008 147 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 GRIK3Q13003 919 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 SLC13A5Q86YT5 568 aaPredicted RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 ATL1Q8WXF7 558 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 HSFY1Q96LI6 401 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 FHDC1Q9C0D6 1143 aaPredicted RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 ISCUQ9H1K1 167 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 PSME2Q9UL46 239 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 DDTLA6NHG4 134 aaPredicted RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 GOLGA8RI6L899 631 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 ZDHHC20Q5W0Z9 365 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 KLHL35Q6PF15 583 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 DCLRE1AQ6PJP8 1040 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 TRMT11Q7Z4G4 463 aaKnown RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 CLEC10AQ8IUN9 316 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 DIS3LQ8TF46 1054 aaKnown RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 PIK3R5Q8WYR1 880 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 ECSITQ9BQ95 431 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 ZSWIM1Q9BR11 485 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 TBC1D14Q9P2M4 693 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 SAE1Q9UBE0 346 aaPredicted RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 SNCAIPQ9Y6H5 919 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 NFIBO00712 420 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 SLC37A4O43826 429 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 GRAP2O75791 330 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 CTSEP14091 401 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 GTF2E2P29084 291 aaKnown RBP8.79□□□□□ -1
PTPN3-204ENST00000446349 OR1E1P30953 314 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 NOMO2Q5JPE7 1267 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 DENND1BQ6P3S1 775 aa8.79□□□□□ -1
PTPN3-204ENST00000446349 OMDQ99983 421 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms