RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 TERF2Q15554 542 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 ARL13BQ3SXY8 428 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 KRT71Q3SY84 523 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 PAN2Q504Q3 1202 aaKnown RBP10.86□□□□□ -0.67
CALD1-211ENST00000445569 ANKRD20A8PQ5CZ79 823 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 PPP6R3Q5H9R7 873 aaPredicted RBP10.86□□□□□ -0.67
CALD1-211ENST00000445569 ZNF280DQ6N043 979 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 HIBCHQ6NVY1 386 aaPredicted RBP10.86□□□□□ -0.67
CALD1-211ENST00000445569 PPP1R21Q6ZMI0 780 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 BNIPLQ7Z465 357 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 CCDC25Q86WR0 208 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 NPAS4Q8IUM7 802 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 PPIL6Q8IXY8 311 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 LRRC43Q8N309 656 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 HASPINQ8TF76 798 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 DPF3Q92784 378 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 NT5C3BQ969T7 300 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 PGAP3Q96FM1 320 aaPredicted RBP10.86□□□□□ -0.67
CALD1-211ENST00000445569 PKMYT1Q99640 499 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 SMOQ99835 787 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 FAM118BQ9BPY3 351 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 RTP3Q9BQQ7 232 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 PAAF1Q9BRP4 392 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 HTATIP2Q9BUP3 242 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 TMEM109Q9BVC6 243 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 FRMD8Q9BZ67 464 aaPredicted RBP10.86□□□□□ -0.67
CALD1-211ENST00000445569 DHX35Q9H5Z1 703 aaKnown RBP10.86□□□□□ -0.67
CALD1-211ENST00000445569 TMBIM4Q9HC24 238 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 TPX2Q9ULW0 747 aaKnown RBP10.86□□□□□ -0.67
CALD1-211ENST00000445569 PLXNA3P51805 1871 aa10.86□□□□□ -0.67
CALD1-211ENST00000445569 MICAL3Q7RTP6 2002 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 BRCA2P51587 3418 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 MKI67P46013 3256 aaKnown RBP10.85□□□□□ -0.67
CALD1-211ENST00000445569 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.85□□□□□ -0.67
CALD1-211ENST00000445569 HACD1B0YJ81 288 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 H0YGN5 161 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 H7C0C1 242 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 I3L4J1 428 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 M0QYT0 321 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 TRIM66O15016 1216 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 EIF3HO15372 352 aaKnown RBP eCLIP10.85□□□□□ -0.67
CALD1-211ENST00000445569 RIPK2O43353 540 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 PQBP1O60828 265 aaKnown RBP10.85□□□□□ -0.67
CALD1-211ENST00000445569 NBNO60934 754 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 STK10O94804 968 aaKnown RBP10.85□□□□□ -0.67
CALD1-211ENST00000445569 OAZ2O95190 189 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 IFNB1P01574 187 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 ABHD2P08910 425 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 PECAM1P16284 738 aaPredicted RBP10.85□□□□□ -0.67
CALD1-211ENST00000445569 CYP2F1P24903 491 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 RFC2P35250 354 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 MAGEA11P43364 429 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 ATP5OP48047 213 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 SMARCB1Q12824 385 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 TRIP13Q15645 432 aaPredicted RBP10.85□□□□□ -0.67
CALD1-211ENST00000445569 DCAF6Q58WW2 860 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 SH3PXD2AQ5TCZ1 1133 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 DARS2Q6PI48 645 aaKnown RBP10.85□□□□□ -0.67
CALD1-211ENST00000445569 CD300LGQ6UXG3 332 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 PDZD4Q76G19 769 aaPredicted RBP10.85□□□□□ -0.67
CALD1-211ENST00000445569 ANKRD33Q7Z3H0 272 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 RTN4RL1Q86UN2 441 aaPredicted RBP10.85□□□□□ -0.67
CALD1-211ENST00000445569 ARHGAP18Q8N392 663 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 ANKLE1Q8NAG6 615 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 ZMIZ2Q8NF64 920 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 DBF4BQ8NFT6 615 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 RTP4Q96DX8 246 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 TOX2Q96NM4 488 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 CCDC77Q9BR77 488 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 TMEM121Q9BTD3 319 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 COLEC11Q9BWP8 271 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 ROPN1BQ9BZX4 212 aaPredicted RBP10.85□□□□□ -0.67
CALD1-211ENST00000445569 HIPK3Q9H422 1215 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 NRDE2Q9H7Z3 1164 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 PPCSQ9HAB8 311 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 ROPN1Q9HAT0 212 aaPredicted RBP10.85□□□□□ -0.67
CALD1-211ENST00000445569 GPATCH2LQ9NWQ4 482 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 PAK5Q9P286 719 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 ADAM21Q9UKJ8 722 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 ADAM28Q9UKQ2 775 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 FZD10Q9ULW2 581 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 RAD54BQ9Y620 910 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 NFS1Q9Y697 457 aa10.85□□□□□ -0.67
CALD1-211ENST00000445569 HHLA1C9JL84 531 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 TADA2AO75478 443 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 BEST1O76090 585 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 CXCL10P02778 98 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 NR1D1P20393 614 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 BDNFP23560 247 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 L1CAMP32004 1257 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 CYP2C18P33260 490 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 HTR7P34969 479 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 ARL4CP56559 192 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 MMRN1Q13201 1228 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 CCDC142Q17RM4 750 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 TTMPQ5BVD1 217 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 ZC3H12AQ5D1E8 599 aaKnown RBP10.84□□□□□ -0.67
CALD1-211ENST00000445569 RNASEH2BQ5TBB1 312 aaKnown RBP10.84□□□□□ -0.67
CALD1-211ENST00000445569 C1orf53Q5VUE5 145 aa10.84□□□□□ -0.67
CALD1-211ENST00000445569 PM20D1Q6GTS8 502 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms