RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 TOB1P50616 345 aaPredicted RBP19.16■□□□□ 0.66
SHANK3-203ENST00000445220 FAM98BQ52LJ0 330 aaKnown RBP19.16■□□□□ 0.66
SHANK3-203ENST00000445220 C9orf131Q5VYM1 1079 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 CHST13Q8NET6 341 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 TSPAN14Q8NG11 270 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 TMEM121Q9BTD3 319 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 SPRTNQ9H040 489 aaPredicted RBP19.16■□□□□ 0.66
SHANK3-203ENST00000445220 COPS7BQ9H9Q2 264 aaPredicted RBP19.16■□□□□ 0.66
SHANK3-203ENST00000445220 GUCA1CO95843 209 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 EIF2S1P05198 315 aaKnown RBP19.16■□□□□ 0.66
SHANK3-203ENST00000445220 ACADSBP45954 432 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 PRKAA1Q13131 559 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 C1DQ13901 141 aaKnown RBP19.16■□□□□ 0.66
SHANK3-203ENST00000445220 PKN2Q16513 984 aaKnown RBP19.16■□□□□ 0.66
SHANK3-203ENST00000445220 DGKDQ16760 1214 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 MAGEC3Q8TD91 643 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 ASZ1Q8WWH4 475 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 ZCWPW1Q9H0M4 648 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 INTS13Q9NVM9 706 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 FAM20BO75063 409 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 RHOBTB1O94844 696 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 CYP11B1P15538 503 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 PIK3R1P27986 724 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 MTTPP55157 894 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 BMPR2Q13873 1038 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 DCAF4L1Q3SXM0 396 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 SGO1Q5FBB7 561 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 CYP4A22Q5TCH4 519 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 NT5DC1Q5TFE4 455 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 SPOCD1Q6ZMY3 1216 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 SETD9Q8NE22 299 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 DCUN1D1Q96GG9 259 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 KAZALD1Q96I82 304 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 DCLK3Q9C098 648 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 ROGDIQ9GZN7 287 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 KCTD10Q9H3F6 313 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 DKK3Q9UBP4 350 aa19.16■□□□□ 0.66
SHANK3-203ENST00000445220 KIDINS220Q9ULH0 1771 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 EXTL3O43909 919 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 CYP11B2P19099 503 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 ALDH1A3P47895 512 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 RAD51Q06609 339 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 MEA1Q16626 185 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 CDRT15Q96T59 188 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 RMND5AQ9H871 391 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 VTI1BQ9UEU0 232 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 SORCS3Q9UPU3 1222 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 SNX9Q9Y5X1 595 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 TSPAN9O75954 239 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 WFS1O76024 890 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 PSMC6P62333 389 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 NR1D2Q14995 579 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 PCSK7Q16549 785 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 ATG16L2Q8NAA4 619 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 NT5C1AQ9BXI3 368 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 KRT84Q9NSB2 600 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 ANXA9O76027 345 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 PGM3O95394 542 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 PROCP04070 461 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 DPEP1P16444 411 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 OTUD3Q5T2D3 398 aaPredicted RBP19.15■□□□□ 0.66
SHANK3-203ENST00000445220 FGD2Q7Z6J4 655 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 NSMCE2Q96MF7 247 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 SRPK1Q96SB4 655 aaKnown RBP19.15■□□□□ 0.66
SHANK3-203ENST00000445220 PRG3Q9Y2Y8 225 aaPredicted RBP19.15■□□□□ 0.66
SHANK3-203ENST00000445220 DCCP43146 1447 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 ENTPD5O75356 428 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 SNX17Q15036 470 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 CYP51A1Q16850 503 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 AGBL3Q8NEM8 1001 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 TMEM143Q96AN5 459 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 ZNF668Q96K58 619 aaPredicted RBP19.15■□□□□ 0.66
SHANK3-203ENST00000445220 UBE2OQ9C0C9 1292 aaKnown RBP19.15■□□□□ 0.66
SHANK3-203ENST00000445220 R3HDM2Q9Y2K5 976 aaKnown RBP19.15■□□□□ 0.66
SHANK3-203ENST00000445220 AK5Q9Y6K8 562 aa19.15■□□□□ 0.66
SHANK3-203ENST00000445220 CENPXA8MT69 81 aa19.14■□□□□ 0.66
SHANK3-203ENST00000445220 TRIM13O60858 407 aa19.14■□□□□ 0.66
SHANK3-203ENST00000445220 PRKCEQ02156 737 aa19.14■□□□□ 0.66
SHANK3-203ENST00000445220 CWF19L1Q69YN2 538 aaKnown RBP19.14■□□□□ 0.66
SHANK3-203ENST00000445220 OTOAQ7RTW8 1153 aa19.14■□□□□ 0.66
SHANK3-203ENST00000445220 EXOC3L1Q86VI1 746 aa19.14■□□□□ 0.66
SHANK3-203ENST00000445220 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.14■□□□□ 0.66
SHANK3-203ENST00000445220 SNX31Q8N9S9 440 aa19.14■□□□□ 0.66
SHANK3-203ENST00000445220 OR6J1Q8NGC5 347 aa19.14■□□□□ 0.66
SHANK3-203ENST00000445220 SELENONQ9NZV5 590 aa19.14■□□□□ 0.66
SHANK3-203ENST00000445220 ACOT9Q9Y305 439 aa19.14■□□□□ 0.66
SHANK3-203ENST00000445220 GH1P01241 217 aa19.14■□□□□ 0.65
SHANK3-203ENST00000445220 JAK1P23458 1154 aa19.14■□□□□ 0.65
SHANK3-203ENST00000445220 AVPR1AP37288 418 aa19.14■□□□□ 0.65
SHANK3-203ENST00000445220 GLRBP48167 497 aa19.14■□□□□ 0.65
SHANK3-203ENST00000445220 NME5P56597 212 aa19.14■□□□□ 0.65
SHANK3-203ENST00000445220 CUL2Q13617 745 aa19.14■□□□□ 0.65
SHANK3-203ENST00000445220 DENND5BQ6ZUT9 1274 aa19.14■□□□□ 0.65
SHANK3-203ENST00000445220 ZNF398Q8TD17 642 aa19.14■□□□□ 0.65
SHANK3-203ENST00000445220 PABPC5Q96DU9 382 aaKnown RBP19.14■□□□□ 0.65
SHANK3-203ENST00000445220 KRT36O76013 467 aa19.14■□□□□ 0.65
SHANK3-203ENST00000445220 RBP1P09455 135 aa19.14■□□□□ 0.65
SHANK3-203ENST00000445220 RRM2P31350 389 aa19.14■□□□□ 0.65
SHANK3-203ENST00000445220 CCT8P50990 548 aa19.14■□□□□ 0.65
SHANK3-203ENST00000445220 BFSP2Q13515 415 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms